RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
CKAP2-202ENST00000378034 N4BP2Q86UW6 1770 aaPredicted RBP16.86■□□□□ 0.29
CKAP2-202ENST00000378034 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
CKAP2-202ENST00000378034 TRMT112Q9UI30 125 aaKnown RBP16.86■□□□□ 0.29
CKAP2-202ENST00000378034 KLRG2A4D1S0 409 aaPredicted RBP16.85■□□□□ 0.29
CKAP2-202ENST00000378034 H0YIN7 160 aa16.85■□□□□ 0.29
CKAP2-202ENST00000378034 DPEP1P16444 411 aa16.85■□□□□ 0.29
CKAP2-202ENST00000378034 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
CKAP2-202ENST00000378034 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
CKAP2-202ENST00000378034 SH3TC1Q8TE82 1336 aa16.85■□□□□ 0.29
CKAP2-202ENST00000378034 DLEC1Q9Y238 1755 aa16.85■□□□□ 0.29
CKAP2-202ENST00000378034 A0A0G2JLW4 131 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 DCAF8L1A6NGE4 600 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 NUTM1Q86Y26 1132 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 IGKV5-2P06315 115 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 CCDC24Q8N4L8 307 aa16.84■□□□□ 0.29
CKAP2-202ENST00000378034 KIF16BQ96L93 1317 aa16.83■□□□□ 0.29
CKAP2-202ENST00000378034 BRCA1P38398 1863 aaKnown RBP16.83■□□□□ 0.28
CKAP2-202ENST00000378034 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
CKAP2-202ENST00000378034 KCNA3P22001 575 aa16.83■□□□□ 0.28
CKAP2-202ENST00000378034 ZBTB38Q8NAP3 1195 aaPredicted RBP16.83■□□□□ 0.28
CKAP2-202ENST00000378034 PIM2Q9P1W9 311 aa16.83■□□□□ 0.28
CKAP2-202ENST00000378034 ABCC12Q96J65 1359 aa16.83■□□□□ 0.28
CKAP2-202ENST00000378034 NEURL1BA8MQ27 555 aa16.82■□□□□ 0.28
CKAP2-202ENST00000378034 CHRNA5P30532 468 aa16.82■□□□□ 0.28
CKAP2-202ENST00000378034 ARHGAP45Q92619 1136 aa16.82■□□□□ 0.28
CKAP2-202ENST00000378034 F6X3S4 739 aa16.82■□□□□ 0.28
CKAP2-202ENST00000378034 PCCAP05165 728 aaPredicted RBP16.82■□□□□ 0.28
CKAP2-202ENST00000378034 BEND3Q5T5X7 828 aa16.82■□□□□ 0.28
CKAP2-202ENST00000378034 SRGNP10124 158 aa16.81■□□□□ 0.28
CKAP2-202ENST00000378034 STYK1Q6J9G0 422 aa16.81■□□□□ 0.28
CKAP2-202ENST00000378034 YTHDC1Q96MU7 727 aaKnown RBP16.81■□□□□ 0.28
CKAP2-202ENST00000378034 NLRP3Q96P20 1036 aa16.81■□□□□ 0.28
CKAP2-202ENST00000378034 API5Q9BZZ5 524 aaKnown RBP16.81■□□□□ 0.28
CKAP2-202ENST00000378034 NOB1Q9ULX3 412 aaKnown RBP16.81■□□□□ 0.28
CKAP2-202ENST00000378034 COL11A2P13942 1736 aaPredicted RBP16.81■□□□□ 0.28
CKAP2-202ENST00000378034 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
CKAP2-202ENST00000378034 CWF19L2Q2TBE0 894 aaKnown RBP16.8■□□□□ 0.28
CKAP2-202ENST00000378034 CRY2Q49AN0 593 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 FAM89AQ96GI7 184 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 MASTLQ96GX5 879 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
CKAP2-202ENST00000378034 LAMB2P55268 1798 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 ALDH1L1O75891 902 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 NPR1P16066 1061 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 GCKRQ14397 625 aa16.8■□□□□ 0.28
CKAP2-202ENST00000378034 GPR162Q16538 588 aa16.79■□□□□ 0.28
CKAP2-202ENST00000378034 DALRD3Q5D0E6 543 aaKnown RBP16.79■□□□□ 0.28
CKAP2-202ENST00000378034 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
CKAP2-202ENST00000378034 CDHR2Q9BYE9 1310 aa16.79■□□□□ 0.28
CKAP2-202ENST00000378034 SRCIN1Q9C0H9 1055 aa16.79■□□□□ 0.28
CKAP2-202ENST00000378034 DDX60Q8IY21 1712 aaKnown RBP16.79■□□□□ 0.28
CKAP2-202ENST00000378034 SLC4A10Q6U841 1118 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 TTLL6Q8N841 843 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 H7C1W4 665 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 IRS4O14654 1257 aaPredicted RBP16.78■□□□□ 0.28
CKAP2-202ENST00000378034 GRIN3BO60391 1043 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 BCAR3O75815 825 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
CKAP2-202ENST00000378034 SYNE4Q8N205 404 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 ZNF622Q969S3 477 aaKnown RBP eCLIP16.78■□□□□ 0.284e-8■■□□□ 14.2
CKAP2-202ENST00000378034 ARFGEF1Q9Y6D6 1849 aa16.78■□□□□ 0.28
CKAP2-202ENST00000378034 ALDH1B1P30837 517 aa16.77■□□□□ 0.28
CKAP2-202ENST00000378034 HOXA10P31260 410 aaPredicted RBP16.77■□□□□ 0.28
CKAP2-202ENST00000378034 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
CKAP2-202ENST00000378034 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.27
CKAP2-202ENST00000378034 BCS1LQ9Y276 419 aa16.77■□□□□ 0.27
CKAP2-202ENST00000378034 YBX3P16989 372 aaKnown RBP eCLIP16.76■□□□□ 0.27
CKAP2-202ENST00000378034 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
CKAP2-202ENST00000378034 RBM17Q96I25 401 aaKnown RBP16.76■□□□□ 0.27
CKAP2-202ENST00000378034 PDE8AO60658 829 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 CCT4P50991 539 aaKnown RBP16.75■□□□□ 0.27
CKAP2-202ENST00000378034 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
CKAP2-202ENST00000378034 CRAMP1Q96RY5 1269 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 ZKSCAN2Q63HK3 967 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 ATF7IPQ6VMQ6 1270 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 C3orf67Q6ZVT6 689 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 UBE3BQ7Z3V4 1068 aa16.75■□□□□ 0.27
CKAP2-202ENST00000378034 GRM8O00222 908 aa16.74■□□□□ 0.27
CKAP2-202ENST00000378034 CASP7P55210 303 aa16.74■□□□□ 0.27
CKAP2-202ENST00000378034 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
CKAP2-202ENST00000378034 PLA2G12BQ9BX93 195 aa16.74■□□□□ 0.27
CKAP2-202ENST00000378034 C9orf78Q9NZ63 289 aaPredicted RBP16.74■□□□□ 0.27
CKAP2-202ENST00000378034 RCAN3Q9UKA8 241 aa16.74■□□□□ 0.27
CKAP2-202ENST00000378034 ABCC4O15439 1325 aa16.73■□□□□ 0.27
CKAP2-202ENST00000378034 MYH3P11055 1940 aa16.73■□□□□ 0.27
CKAP2-202ENST00000378034 PRPF40BQ6NWY9 871 aaKnown RBP16.73■□□□□ 0.27
CKAP2-202ENST00000378034 DDX46Q7L014 1031 aaKnown RBP16.73■□□□□ 0.27
CKAP2-202ENST00000378034 JARID2Q92833 1246 aaPredicted RBP16.73■□□□□ 0.27
CKAP2-202ENST00000378034 WWC3Q9ULE0 1092 aa16.73■□□□□ 0.27
CKAP2-202ENST00000378034 UTYO14607 1347 aa16.72■□□□□ 0.27
CKAP2-202ENST00000378034 CACNA1SQ13698 1873 aa16.72■□□□□ 0.27
CKAP2-202ENST00000378034 TRIM27P14373 513 aa16.72■□□□□ 0.27
CKAP2-202ENST00000378034 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
CKAP2-202ENST00000378034 SLX4Q8IY92 1834 aa16.72■□□□□ 0.27
CKAP2-202ENST00000378034 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.27
CKAP2-202ENST00000378034 INTS3Q68E01 1043 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms