RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SYT1P21579 422 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 ASXL2Q76L83 1435 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 BABAM1Q9NWV8 329 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 TMEM63CQ9P1W3 806 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 IL13P35225 146 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 KCNG4Q8TDN1 519 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 PLEKHF1Q96S99 279 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 CCDC8Q9H0W5 538 aaPredicted RBP10.18□□□□□ -0.78
PCDH9-202ENST00000377865 PHAXQ9H814 394 aaKnown RBP10.18□□□□□ -0.78
PCDH9-202ENST00000377865 MAP3K4Q9Y6R4 1608 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 E9PCH4 1651 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 GSPT1P15170 499 aaKnown RBP10.18□□□□□ -0.78
PCDH9-202ENST00000377865 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 SPHKAPQ2M3C7 1700 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 TUBB4BP68371 445 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 RGS12O14924 1447 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 MYL6BP14649 208 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 ERO1AQ96HE7 468 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 DNAJC25Q9H1X3 360 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 CEP126Q9P2H0 1117 aa10.18□□□□□ -0.78
PCDH9-202ENST00000377865 CCDC57Q2TAC2 916 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 THEMISQ8N1K5 641 aaPredicted RBP10.17□□□□□ -0.78
PCDH9-202ENST00000377865 MRPS27Q92552 414 aaKnown RBP10.17□□□□□ -0.78
PCDH9-202ENST00000377865 MAP3K2Q9Y2U5 619 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 NECAB1Q8N987 351 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 PLA2R1Q13018 1463 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 CALRP27797 417 aaKnown RBP10.17□□□□□ -0.78
PCDH9-202ENST00000377865 VPS37DQ86XT2 251 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 DEF6Q9H4E7 631 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 KANK3Q6NY19 840 aa10.17□□□□□ -0.78
PCDH9-202ENST00000377865 FLT4P35916 1363 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 GOLGA6L10A6NI86 522 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CABP4P57796 275 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CCDC181Q5TID7 509 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CLSTN2Q9H4D0 955 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 ACEP12821 1306 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 RIOK3O14730 519 aaKnown RBP10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CREB3L3Q68CJ9 461 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 GPT2Q8TD30 523 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 DDX54Q8TDD1 881 aaKnown RBP10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CLSTN1O94985 981 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 FKBP4Q02790 459 aaKnown RBP eCLIP10.16□□□□□ -0.78
PCDH9-202ENST00000377865 ESCO1Q5FWF5 840 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CNNM3Q8NE01 707 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 CNNM1Q9NRU3 951 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 SNX14Q9Y5W7 946 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 IVLP07476 585 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 IFIT1P09914 478 aaKnown RBP10.16□□□□□ -0.78
PCDH9-202ENST00000377865 HSPA4P34932 840 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 MYD88Q99836 296 aa10.16□□□□□ -0.78
PCDH9-202ENST00000377865 MAP3K5Q99683 1374 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 POLR3GO15318 223 aaPredicted RBP10.15□□□□□ -0.78
PCDH9-202ENST00000377865 GTF2F1P35269 517 aaKnown RBP eCLIP10.15□□□□□ -0.78
PCDH9-202ENST00000377865 EVA1CP58658 441 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 SHTN1A0MZ66 631 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 GOLGA8BA8MQT2 603 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 EPS15P42566 896 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 OTUD7AQ8TE49 926 aaPredicted RBP10.15□□□□□ -0.78
PCDH9-202ENST00000377865 CRACR2AQ9BSW2 395 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 RTL1A6NKG5 1358 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 PI4KAP2A4QPH2 592 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 CHL1O00533 1208 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 ATP2B1P20020 1258 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 ZNF75DP51815 510 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 NMIQ13287 307 aaPredicted RBP10.15□□□□□ -0.78
PCDH9-202ENST00000377865 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 AOPEPQ8N6M6 819 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 PI4KAP1Q8N8J0 262 aa10.15□□□□□ -0.78
PCDH9-202ENST00000377865 GTF2E1P29083 439 aaPredicted RBP10.15□□□□□ -0.79
PCDH9-202ENST00000377865 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.79
PCDH9-202ENST00000377865 CLTCL1P53675 1640 aa10.15□□□□□ -0.79
PCDH9-202ENST00000377865 POGZQ7Z3K3 1410 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 CYB5RLQ6IPT4 315 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 KIAA1328Q86T90 577 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 ANKRD24Q8TF21 1146 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 PYM1Q9BRP8 204 aaKnown RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 RRP12Q5JTH9 1297 aaKnown RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 UTP14CQ5TAP6 766 aaKnown RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 SGSM2O43147 1006 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 SSRP1Q08945 709 aaKnown RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 Q6ZUG5 572 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 IMPACTQ9P2X3 320 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 ARHGEF10O15013 1369 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 UBASH3AP57075 661 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 GUCY1B3Q02153 619 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 MCMDC2Q4G0Z9 681 aa10.14□□□□□ -0.79
PCDH9-202ENST00000377865 GNL3LQ9NVN8 582 aaKnown RBP10.14□□□□□ -0.79
PCDH9-202ENST00000377865 CCT2P78371 535 aaKnown RBP10.13□□□□□ -0.79
PCDH9-202ENST00000377865 MTHFSDQ2M296 383 aaKnown RBP10.13□□□□□ -0.79
PCDH9-202ENST00000377865 CLEC17AQ6ZS10 378 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 ARFGAP3Q9NP61 516 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 ZNF213O14771 459 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 ERLIN2O94905 339 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 CCDC102BQ68D86 513 aa10.13□□□□□ -0.79
PCDH9-202ENST00000377865 TM6SF1Q9BZW5 370 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms