RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 USP5P45974 858 aa21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ZSCAN16Q9H4T2 348 aaPredicted RBP21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ERLIN1O75477 346 aa21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 JARID2Q92833 1246 aaPredicted RBP21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ZPR1O75312 459 aa21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 PODXL2Q9NZ53 605 aa21.73■■□□□ 1.07
CNTNAP3B-203ENST00000377561 EPB41L2O43491 1005 aaKnown RBP21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 LINS1Q8NG48 757 aa21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 NCOA7Q8NI08 942 aa21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 DDX46Q7L014 1031 aaKnown RBP21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ADCY5O95622 1261 aa21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 CAVIN2O95810 425 aa21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 NEFHP12036 1026 aa21.72■■□□□ 1.07
CNTNAP3B-203ENST00000377561 RANBP6O60518 1105 aaKnown RBP21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 STX1AQ16623 288 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 MKNK2Q9HBH9 465 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 RAB3GAP1Q15042 981 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ORC3Q9UBD5 711 aaPredicted RBP21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 ARHGEF5Q12774 1597 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 EDC4Q6P2E9 1401 aaKnown RBP21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 IL13P35225 146 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 UBE2Q2Q8WVN8 375 aa21.71■■□□□ 1.07
CNTNAP3B-203ENST00000377561 NEMFO60524 1076 aa21.7■■□□□ 1.07
CNTNAP3B-203ENST00000377561 CCDC181Q5TID7 509 aa21.7■■□□□ 1.07
CNTNAP3B-203ENST00000377561 SSBP05455 408 aaKnown RBP eCLIP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 SLC39A6Q13433 755 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZSCAN29Q8IWY8 852 aaPredicted RBP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CCDC82Q8N4S0 544 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 NECAB1Q8N987 351 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 PTPRTO14522 1441 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZSCAN12O43309 604 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 IARSP41252 1262 aaKnown RBP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 BRF1Q92994 677 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 DZIP1Q86YF9 867 aaKnown RBP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 POLR3DP05423 398 aaPredicted RBP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZFYP08048 801 aaPredicted RBP21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 HAND2P61296 217 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ARHGAP29Q52LW3 1261 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CNNM3Q8NE01 707 aa21.7■■□□□ 1.06
CNTNAP3B-203ENST00000377561 EIF5P55010 431 aaKnown RBP21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 HMGB2P26583 209 aaKnown RBP21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZNF165P49910 485 aa21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 PDCL2Q8N4E4 241 aa21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 SEC63Q9UGP8 760 aaKnown RBP21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CEP170Q5SW79 1584 aa21.69■■□□□ 1.06
CNTNAP3B-203ENST00000377561 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 GOLGA6L10A6NI86 522 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TOP1P11387 765 aaKnown RBP21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 XRCC6P12956 609 aaKnown RBP eCLIP21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TMEM67Q5HYA8 995 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 UBXN4Q92575 508 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 UQCRFS1P1P0C7P4 283 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 MCMDC2Q4G0Z9 681 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 KIF18AQ8NI77 898 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZCRB1Q8TBF4 217 aaKnown RBP21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TSPYL1Q9H0U9 437 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 PIP4K2BP78356 416 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 MSH6P52701 1360 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 HOXC9P31274 260 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CATIPQ7Z7H3 387 aa21.68■■□□□ 1.06
CNTNAP3B-203ENST00000377561 LRRC59Q96AG4 307 aaKnown RBP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 USP26Q9BXU7 913 aa21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 LMBR1LQ6UX01 489 aa21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CDC5LQ99459 802 aaKnown RBP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 IL15P40933 162 aaPredicted RBP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 METAP2P50579 478 aaKnown RBP eCLIP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZRSR2Q15696 482 aaKnown RBP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 USP48Q86UV5 1035 aa21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 NPHP3Q7Z494 1330 aa21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 PA2G4Q9UQ80 394 aaKnown RBP21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CNPY2Q9Y2B0 182 aa21.67■■□□□ 1.06
CNTNAP3B-203ENST00000377561 EIF3JO75822 258 aaKnown RBP21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 GSDMDP57764 484 aa21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 KLHL10Q6JEL2 608 aa21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 LEKR1Q6ZMV7 388 aa21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 HCLS1P14317 486 aaPredicted RBP21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ANKIB1Q9P2G1 1089 aa21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 IQCEQ6IPM2 695 aa21.66■■□□□ 1.06
CNTNAP3B-203ENST00000377561 CHMLP26374 656 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 F13A1P00488 732 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 NMIQ13287 307 aaPredicted RBP21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 MFSD6Q6ZSS7 791 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 RBM25P49756 843 aaKnown RBP21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 GIMAP6Q6P9H5 292 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 MICU3Q86XE3 530 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 ZNF444Q8N0Y2 327 aaPredicted RBP21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 BABAM1Q9NWV8 329 aa21.65■■□□□ 1.06
CNTNAP3B-203ENST00000377561 SEPT7Q16181 437 aaKnown RBP21.64■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TCEANC2Q96MN5 208 aa21.64■■□□□ 1.06
CNTNAP3B-203ENST00000377561 TBX22Q9Y458 520 aa21.64■■□□□ 1.06
CNTNAP3B-203ENST00000377561 INTS4Q96HW7 963 aaKnown RBP21.64■■□□□ 1.05
CNTNAP3B-203ENST00000377561 ADAMTS2O95450 1211 aa21.64■■□□□ 1.05
CNTNAP3B-203ENST00000377561 ZNF76P36508 570 aa21.64■■□□□ 1.05
CNTNAP3B-203ENST00000377561 KIAA1328Q86T90 577 aa21.64■■□□□ 1.05
CNTNAP3B-203ENST00000377561 ANKRD18AQ8IVF6 992 aa21.64■■□□□ 1.05
CNTNAP3B-203ENST00000377561 IP6K1Q92551 441 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms