RNA–Protein interactions for RNA: ENST00000376899.8

YIF1A-202, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 1,042 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-202ENST00000376899 FKBP5Q13451 457 aaPredicted RBP28.94■■■□□ 2.22
YIF1A-202ENST00000376899 NUTM1Q86Y26 1132 aa28.94■■■□□ 2.22
YIF1A-202ENST00000376899 MYD88Q99836 296 aa28.94■■■□□ 2.22
YIF1A-202ENST00000376899 ATP5J2-PTCD1G3V325 749 aa28.93■■■□□ 2.22
YIF1A-202ENST00000376899 CHRNA5P30532 468 aa28.93■■■□□ 2.22
YIF1A-202ENST00000376899 KLRG2A4D1S0 409 aaPredicted RBP28.92■■■□□ 2.22
YIF1A-202ENST00000376899 GTF2E1P29083 439 aaPredicted RBP28.92■■■□□ 2.22
YIF1A-202ENST00000376899 ERFEQ4G0M1 354 aa28.92■■■□□ 2.22
YIF1A-202ENST00000376899 ARFGEF1Q9Y6D6 1849 aa28.92■■■□□ 2.22
YIF1A-202ENST00000376899 LAMB2P55268 1798 aa28.91■■■□□ 2.22
YIF1A-202ENST00000376899 C2CD5Q86YS7 1000 aa28.91■■■□□ 2.22
YIF1A-202ENST00000376899 DDX60Q8IY21 1712 aaKnown RBP28.9■■■□□ 2.22
YIF1A-202ENST00000376899 CCDC191Q8NCU4 936 aa28.9■■■□□ 2.22
YIF1A-202ENST00000376899 DNAAF4Q8WXU2 420 aa28.9■■■□□ 2.22
YIF1A-202ENST00000376899 H0YIN7 160 aa28.89■■■□□ 2.22
YIF1A-202ENST00000376899 IGKV5-2P06315 115 aa28.89■■■□□ 2.22
YIF1A-202ENST00000376899 BRPF1P55201 1214 aaPredicted RBP28.89■■■□□ 2.22
YIF1A-202ENST00000376899 SLC10A5Q5PT55 438 aa28.89■■■□□ 2.22
YIF1A-202ENST00000376899 TRMT112Q9UI30 125 aaKnown RBP28.89■■■□□ 2.22
YIF1A-202ENST00000376899 SH3TC1Q8TE82 1336 aa28.89■■■□□ 2.21
YIF1A-202ENST00000376899 YBX3P16989 372 aaKnown RBP eCLIP28.88■■■□□ 2.213e-6■□□□□ 10
YIF1A-202ENST00000376899 RARSP54136 660 aaKnown RBP28.88■■■□□ 2.21
YIF1A-202ENST00000376899 NEXNQ0ZGT2 675 aa28.88■■■□□ 2.21
YIF1A-202ENST00000376899 BCL2L13Q9BXK5 485 aa28.88■■■□□ 2.21
YIF1A-202ENST00000376899 SMC4Q9NTJ3 1288 aa28.88■■■□□ 2.21
YIF1A-202ENST00000376899 PIM2Q9P1W9 311 aa28.88■■■□□ 2.21
YIF1A-202ENST00000376899 DCAF8L1A6NGE4 600 aa28.87■■■□□ 2.21
YIF1A-202ENST00000376899 SRGNP10124 158 aa28.87■■■□□ 2.21
YIF1A-202ENST00000376899 PTPRCP08575 1304 aa28.87■■■□□ 2.21
YIF1A-202ENST00000376899 GPR162Q16538 588 aa28.86■■■□□ 2.21
YIF1A-202ENST00000376899 CRY2Q49AN0 593 aa28.86■■■□□ 2.21
YIF1A-202ENST00000376899 CWC25Q9NXE8 425 aaPredicted RBP28.86■■■□□ 2.21
YIF1A-202ENST00000376899 STYK1Q6J9G0 422 aa28.85■■■□□ 2.21
YIF1A-202ENST00000376899 NEURL1BA8MQ27 555 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 F6X3S4 739 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 PELP1Q8IZL8 1130 aaKnown RBP28.84■■■□□ 2.21
YIF1A-202ENST00000376899 SYNE4Q8N205 404 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 ZBTB38Q8NAP3 1195 aaPredicted RBP28.84■■■□□ 2.21
YIF1A-202ENST00000376899 LINS1Q8NG48 757 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 WWC3Q9ULE0 1092 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 CACNA1SQ13698 1873 aa28.84■■■□□ 2.21
YIF1A-202ENST00000376899 PCCAP05165 728 aaPredicted RBP28.83■■■□□ 2.21
YIF1A-202ENST00000376899 FAM89AQ96GI7 184 aa28.83■■■□□ 2.21
YIF1A-202ENST00000376899 MASTLQ96GX5 879 aa28.83■■■□□ 2.21
YIF1A-202ENST00000376899 NPR1P16066 1061 aa28.82■■■□□ 2.2
YIF1A-202ENST00000376899 CWF19L2Q2TBE0 894 aaKnown RBP28.82■■■□□ 2.2
YIF1A-202ENST00000376899 DALRD3Q5D0E6 543 aaKnown RBP28.82■■■□□ 2.2
YIF1A-202ENST00000376899 BCS1LQ9Y276 419 aa28.82■■■□□ 2.2
YIF1A-202ENST00000376899 BEND3Q5T5X7 828 aa28.81■■■□□ 2.2
YIF1A-202ENST00000376899 TTLL6Q8N841 843 aa28.81■■■□□ 2.2
YIF1A-202ENST00000376899 GRIN3BO60391 1043 aa28.8■■■□□ 2.2
YIF1A-202ENST00000376899 HCLS1P14317 486 aaPredicted RBP28.8■■■□□ 2.2
YIF1A-202ENST00000376899 C3orf67Q6ZVT6 689 aa28.8■■■□□ 2.2
YIF1A-202ENST00000376899 ZNF622Q969S3 477 aaKnown RBP eCLIP28.8■■■□□ 2.2
YIF1A-202ENST00000376899 NLRP3Q96P20 1036 aa28.8■■■□□ 2.2
YIF1A-202ENST00000376899 SLX4Q8IY92 1834 aa28.8■■■□□ 2.2
YIF1A-202ENST00000376899 CNKSR1Q969H4 720 aa28.79■■■□□ 2.2
YIF1A-202ENST00000376899 KIF16BQ96L93 1317 aa28.78■■■□□ 2.2
YIF1A-202ENST00000376899 CDHR2Q9BYE9 1310 aa28.78■■■□□ 2.2
YIF1A-202ENST00000376899 HOXA10P31260 410 aaPredicted RBP28.78■■■□□ 2.2
YIF1A-202ENST00000376899 GCKRQ14397 625 aa28.78■■■□□ 2.2
YIF1A-202ENST00000376899 IRS4O14654 1257 aaPredicted RBP28.77■■■□□ 2.2
YIF1A-202ENST00000376899 MYH3P11055 1940 aa28.77■■■□□ 2.2
YIF1A-202ENST00000376899 CHD4Q14839 1912 aa28.77■■■□□ 2.2
YIF1A-202ENST00000376899 H7C1W4 665 aa28.76■■■□□ 2.19
YIF1A-202ENST00000376899 RTL5Q5HYW3 569 aaPredicted RBP28.76■■■□□ 2.19
YIF1A-202ENST00000376899 NOB1Q9ULX3 412 aaKnown RBP28.76■■■□□ 2.19
YIF1A-202ENST00000376899 ALDH1L1O75891 902 aa28.75■■■□□ 2.19
YIF1A-202ENST00000376899 HSP90B1P14625 803 aaKnown RBP28.75■■■□□ 2.19
YIF1A-202ENST00000376899 SLC4A10Q6U841 1118 aa28.74■■■□□ 2.19
YIF1A-202ENST00000376899 RPGRQ92834 1020 aaKnown RBP28.74■■■□□ 2.19
YIF1A-202ENST00000376899 ALDH1B1P30837 517 aa28.73■■■□□ 2.19
YIF1A-202ENST00000376899 CASP7P55210 303 aa28.73■■■□□ 2.19
YIF1A-202ENST00000376899 SF3B3Q15393 1217 aaKnown RBP28.73■■■□□ 2.19
YIF1A-202ENST00000376899 PRPF40BQ6NWY9 871 aaKnown RBP28.73■■■□□ 2.19
YIF1A-202ENST00000376899 ARHGAP45Q92619 1136 aa28.73■■■□□ 2.19
YIF1A-202ENST00000376899 CRAMP1Q96RY5 1269 aa28.73■■■□□ 2.19
YIF1A-202ENST00000376899 SRCIN1Q9C0H9 1055 aa28.73■■■□□ 2.19
YIF1A-202ENST00000376899 BCAR3O75815 825 aa28.72■■■□□ 2.19
YIF1A-202ENST00000376899 JARID2Q92833 1246 aaPredicted RBP28.72■■■□□ 2.19
YIF1A-202ENST00000376899 RBM17Q96I25 401 aaKnown RBP28.72■■■□□ 2.19
YIF1A-202ENST00000376899 API5Q9BZZ5 524 aaKnown RBP28.72■■■□□ 2.19
YIF1A-202ENST00000376899 PDE8AO60658 829 aa28.71■■■□□ 2.19
YIF1A-202ENST00000376899 UBE3BQ7Z3V4 1068 aa28.71■■■□□ 2.19
YIF1A-202ENST00000376899 FER1L6Q2WGJ9 1857 aa28.7■■■□□ 2.19
YIF1A-202ENST00000376899 C7orf43Q8WVR3 580 aa28.7■■■□□ 2.18
YIF1A-202ENST00000376899 PLA2G12BQ9BX93 195 aa28.69■■■□□ 2.18
YIF1A-202ENST00000376899 ABCC4O15439 1325 aa28.69■■■□□ 2.18
YIF1A-202ENST00000376899 GOLGB1Q14789 3259 aaKnown RBP28.68■■■□□ 2.18
YIF1A-202ENST00000376899 TAF1P21675 1872 aa28.68■■■□□ 2.18
YIF1A-202ENST00000376899 GRM8O00222 908 aa28.67■■■□□ 2.18
YIF1A-202ENST00000376899 IPO8O15397 1037 aaKnown RBP28.67■■■□□ 2.18
YIF1A-202ENST00000376899 YTHDC1Q96MU7 727 aaKnown RBP28.67■■■□□ 2.18
YIF1A-202ENST00000376899 C21orf2O43822 256 aa28.66■■■□□ 2.18
YIF1A-202ENST00000376899 DDX46Q7L014 1031 aaKnown RBP28.66■■■□□ 2.18
YIF1A-202ENST00000376899 UTYO14607 1347 aa28.66■■■□□ 2.18
YIF1A-202ENST00000376899 CTSWP56202 376 aa28.65■■■□□ 2.18
YIF1A-202ENST00000376899 SOGA3Q5TF21 947 aa28.65■■■□□ 2.18
YIF1A-202ENST00000376899 SBF1O95248 1867 aa28.65■■■□□ 2.18
YIF1A-202ENST00000376899 COL4A1P02462 1669 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms