RNA–Protein interactions for RNA: ENST00000376800.7

HCG9-201, Transcript of HLA complex group 9, humanhuman

TSL 1 (best) BASIC

Gene HCG9, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-201ENST00000376800 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
HCG9-201ENST00000376800 RIC1Q4ADV7 1423 aa17.67■□□□□ 0.42
HCG9-201ENST00000376800 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
HCG9-201ENST00000376800 CRY2Q49AN0 593 aa17.67■□□□□ 0.42
HCG9-201ENST00000376800 SYNE4Q8N205 404 aa17.67■□□□□ 0.42
HCG9-201ENST00000376800 DDNO94850 711 aaPredicted RBP17.66■□□□□ 0.42
HCG9-201ENST00000376800 HDGFL1Q5TGJ6 251 aa17.66■□□□□ 0.42
HCG9-201ENST00000376800 COL4A1P02462 1669 aa17.65■□□□□ 0.42
HCG9-201ENST00000376800 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
HCG9-201ENST00000376800 DDX21Q9NR30 783 aaKnown RBP eCLIP17.65■□□□□ 0.42
HCG9-201ENST00000376800 ZNF541Q9H0D2 1346 aa17.65■□□□□ 0.42
HCG9-201ENST00000376800 ELL2O00472 640 aaPredicted RBP17.64■□□□□ 0.41
HCG9-201ENST00000376800 ZNF853P0CG23 659 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 POTEIP0CG38 1075 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 POTEJP0CG39 1038 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 SOGA3Q5TF21 947 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 DUSP27Q5VZP5 1158 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 RPGRQ92834 1020 aaKnown RBP17.64■□□□□ 0.41
HCG9-201ENST00000376800 CFAP44Q96MT7 982 aa17.64■□□□□ 0.41
HCG9-201ENST00000376800 HCLS1P14317 486 aaPredicted RBP17.63■□□□□ 0.41
HCG9-201ENST00000376800 NLRP10Q86W26 655 aa17.63■□□□□ 0.41
HCG9-201ENST00000376800 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
HCG9-201ENST00000376800 VEGFAP15692 232 aaPredicted RBP17.62■□□□□ 0.41
HCG9-201ENST00000376800 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
HCG9-201ENST00000376800 APLP1P51693 650 aa17.62■□□□□ 0.41
HCG9-201ENST00000376800 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
HCG9-201ENST00000376800 PPP1R42Q7Z4L9 355 aa17.62■□□□□ 0.41
HCG9-201ENST00000376800 PCNTO95613 3336 aa17.62■□□□□ 0.41
HCG9-201ENST00000376800 HOXA10P31260 410 aaPredicted RBP17.61■□□□□ 0.41
HCG9-201ENST00000376800 ATP5J2-PTCD1G3V325 749 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 PPEF1O14829 653 aaPredicted RBP17.6■□□□□ 0.41
HCG9-201ENST00000376800 IARSP41252 1262 aaKnown RBP17.6■□□□□ 0.41
HCG9-201ENST00000376800 FSTL1Q12841 308 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 TCIRG1Q13488 830 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 C8orf58Q8NAV2 365 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 SMC1BQ8NDV3 1235 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 IFT57Q9NWB7 429 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 ABCC4O15439 1325 aa17.6■□□□□ 0.41
HCG9-201ENST00000376800 SCN4AP35499 1836 aa17.59■□□□□ 0.41
HCG9-201ENST00000376800 LTBP1Q14766 1721 aa17.59■□□□□ 0.41
HCG9-201ENST00000376800 RTKN2Q8IZC4 609 aa17.59■□□□□ 0.41
HCG9-201ENST00000376800 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
HCG9-201ENST00000376800 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
HCG9-201ENST00000376800 RBM17Q96I25 401 aaKnown RBP17.59■□□□□ 0.41
HCG9-201ENST00000376800 PHAXQ9H814 394 aaKnown RBP17.59■□□□□ 0.41
HCG9-201ENST00000376800 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
HCG9-201ENST00000376800 ZNF316A6NFI3 1004 aaPredicted RBP17.58■□□□□ 0.4
HCG9-201ENST00000376800 HOXB7P09629 217 aa17.58■□□□□ 0.4
HCG9-201ENST00000376800 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
HCG9-201ENST00000376800 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.4
HCG9-201ENST00000376800 NLRP3Q96P20 1036 aa17.58■□□□□ 0.4
HCG9-201ENST00000376800 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.4
HCG9-201ENST00000376800 DBF4Q9UBU7 674 aaPredicted RBP17.58■□□□□ 0.4
HCG9-201ENST00000376800 GNAI1P63096 354 aa17.57■□□□□ 0.4
HCG9-201ENST00000376800 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
HCG9-201ENST00000376800 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
HCG9-201ENST00000376800 TSPYL6Q8N831 410 aa17.57■□□□□ 0.4
HCG9-201ENST00000376800 PLBD2Q8NHP8 589 aa17.57■□□□□ 0.4
HCG9-201ENST00000376800 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 ANKRD13DQ6ZTN6 518 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 PSMD1Q99460 953 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 DUOX1Q9NRD9 1551 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 ADAMTSL1Q8N6G6 1762 aa17.56■□□□□ 0.4
HCG9-201ENST00000376800 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
HCG9-201ENST00000376800 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
HCG9-201ENST00000376800 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
HCG9-201ENST00000376800 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
HCG9-201ENST00000376800 FZD9O00144 591 aa17.54■□□□□ 0.4
HCG9-201ENST00000376800 HYPKQ9NX55 129 aa17.54■□□□□ 0.4
HCG9-201ENST00000376800 SALL2Q9Y467 1007 aaPredicted RBP17.54■□□□□ 0.4
HCG9-201ENST00000376800 AOC3Q16853 763 aa17.53■□□□□ 0.4
HCG9-201ENST00000376800 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
HCG9-201ENST00000376800 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
HCG9-201ENST00000376800 TAF1DQ9H5J8 278 aaPredicted RBP17.53■□□□□ 0.4
HCG9-201ENST00000376800 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
HCG9-201ENST00000376800 EAPPQ56P03 285 aaPredicted RBP17.52■□□□□ 0.4
HCG9-201ENST00000376800 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.4
HCG9-201ENST00000376800 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
HCG9-201ENST00000376800 MYD88Q99836 296 aa17.52■□□□□ 0.4
HCG9-201ENST00000376800 ATP6V0A2Q9Y487 856 aa17.52■□□□□ 0.4
HCG9-201ENST00000376800 GJA3Q9Y6H8 435 aa17.52■□□□□ 0.4
HCG9-201ENST00000376800 ANP32CO43423 234 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 CC2D2BQ6DHV5 1058 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 KLRG1Q96E93 195 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
HCG9-201ENST00000376800 PPIP5K2O43314 1243 aa17.5■□□□□ 0.39
HCG9-201ENST00000376800 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
HCG9-201ENST00000376800 GRAPQ13588 217 aa17.5■□□□□ 0.39
HCG9-201ENST00000376800 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
HCG9-201ENST00000376800 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
HCG9-201ENST00000376800 JDP2Q8WYK2 163 aa17.5■□□□□ 0.39
HCG9-201ENST00000376800 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
HCG9-201ENST00000376800 HACL1Q9UJ83 578 aa17.49■□□□□ 0.39
HCG9-201ENST00000376800 IQCA1LA6NCM1 817 aa17.48■□□□□ 0.39
HCG9-201ENST00000376800 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
HCG9-201ENST00000376800 EPHX2P34913 555 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms