RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 TSNAXIP1Q2TAA8 658 aa13.28□□□□□ -0.28
VPS13A-205ENST00000376636 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
VPS13A-205ENST00000376636 CATIPQ7Z7H3 387 aa13.28□□□□□ -0.28
VPS13A-205ENST00000376636 EXOC1Q9NV70 894 aa13.28□□□□□ -0.28
VPS13A-205ENST00000376636 KRT13P13646 458 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 SLF2Q8IX21 1173 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 TCP11L2Q8N4U5 519 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 ARFGAP2Q8N6H7 521 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 GOLGA1Q92805 767 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 ARID4AP29374 1257 aaPredicted RBP13.27□□□□□ -0.28
VPS13A-205ENST00000376636 MCM6Q14566 821 aa13.27□□□□□ -0.28
VPS13A-205ENST00000376636 UVSSAQ2YD98 709 aa13.27□□□□□ -0.29
VPS13A-205ENST00000376636 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS13A-205ENST00000376636 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
VPS13A-205ENST00000376636 IDH1O75874 414 aaKnown RBP13.27□□□□□ -0.29
VPS13A-205ENST00000376636 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
VPS13A-205ENST00000376636 RBM42Q9BTD8 480 aaKnown RBP13.27□□□□□ -0.29
VPS13A-205ENST00000376636 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.29
VPS13A-205ENST00000376636 ZBTB17Q13105 803 aa13.27□□□□□ -0.29
VPS13A-205ENST00000376636 RAB3IPQ96QF0 476 aaPredicted RBP13.27□□□□□ -0.29
VPS13A-205ENST00000376636 CABP4P57796 275 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 NCAPGQ9BPX3 1015 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 TSGA10Q9BZW7 698 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 PHLDB2Q86SQ0 1253 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
VPS13A-205ENST00000376636 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
VPS13A-205ENST00000376636 MTHFSP49914 203 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 UBE2HP62256 183 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 MGEA5O60502 916 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 CPLX3Q8WVH0 158 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
VPS13A-205ENST00000376636 PPP1R1BQ9UD71 204 aaPredicted RBP13.26□□□□□ -0.29
VPS13A-205ENST00000376636 TMX1Q9H3N1 280 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
VPS13A-205ENST00000376636 KRT86O43790 486 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 AKR1B10O60218 316 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 NEDD9Q14511 834 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 FYB2Q5VWT5 728 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 SEPT14Q6ZU15 432 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 MSANTD4Q8NCY6 345 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 INTS8Q75QN2 995 aaKnown RBP13.25□□□□□ -0.29
VPS13A-205ENST00000376636 ZNF354CQ86Y25 554 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 MAP7Q14244 749 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 PRR16Q569H4 304 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 AFAP1L2Q8N4X5 818 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 RBM28Q9NW13 759 aaKnown RBP13.25□□□□□ -0.29
VPS13A-205ENST00000376636 AKNAQ7Z591 1439 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 PRKAR2BP31323 418 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 PCK1P35558 622 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 NLRP6P59044 892 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 ZNF526Q8TF50 670 aaPredicted RBP13.25□□□□□ -0.29
VPS13A-205ENST00000376636 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
VPS13A-205ENST00000376636 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
VPS13A-205ENST00000376636 CEP85LQ5SZL2 805 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 FSIP1Q8NA03 581 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
VPS13A-205ENST00000376636 POLR3DP05423 398 aaPredicted RBP13.24□□□□□ -0.29
VPS13A-205ENST00000376636 SPTY2D1Q68D10 685 aaPredicted RBP13.24□□□□□ -0.29
VPS13A-205ENST00000376636 VPS52Q8N1B4 723 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 A0A1B0GUL7 405 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 ZNF165P49910 485 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 CKAP2LQ8IYA6 745 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 ERMNQ8TAM6 284 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 VAV2P52735 878 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 CCDC88BA6NC98 1476 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 GABPB2Q8TAK5 448 aaPredicted RBP13.24□□□□□ -0.29
VPS13A-205ENST00000376636 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 BICD1Q96G01 975 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 GOLGA8AA7E2F4 631 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 GOLGA8BA8MQT2 603 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 KRT83P78385 493 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
VPS13A-205ENST00000376636 BUB1BO60566 1050 aaPredicted RBP13.23□□□□□ -0.29
VPS13A-205ENST00000376636 POTEDQ86YR6 584 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 TRPC3Q13507 836 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 IMPG2Q9BZV3 1241 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 CCDC170Q8IYT3 715 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 SPAG5Q96R06 1193 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 ARHGAP24Q8N264 748 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 GPR161Q8N6U8 529 aaKnown RBP13.23□□□□□ -0.29
VPS13A-205ENST00000376636 CRCPO75575 148 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 PFDN4Q9NQP4 134 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 TACC3Q9Y6A5 838 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 BMP15O95972 392 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 MYL6BP14649 208 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 CCT6BQ92526 530 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 NLRP5P59047 1200 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
VPS13A-205ENST00000376636 MAP3K12Q12852 859 aa13.23□□□□□ -0.29
VPS13A-205ENST00000376636 ZSCAN16Q9H4T2 348 aaPredicted RBP13.23□□□□□ -0.29
VPS13A-205ENST00000376636 UBASH3AP57075 661 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms