RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 EAF2Q96CJ1 260 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-203ENST00000376619 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-203ENST00000376619 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
HDAC6-203ENST00000376619 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC6-203ENST00000376619 USP6P35125 1406 aa13.22□□□□□ -0.29
HDAC6-203ENST00000376619 G3V3G9 751 aa13.22□□□□□ -0.29
HDAC6-203ENST00000376619 STARD3NLO95772 234 aa13.22□□□□□ -0.29
HDAC6-203ENST00000376619 HCLS1P14317 486 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-203ENST00000376619 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
HDAC6-203ENST00000376619 CHGBP05060 677 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 SYNE3Q6ZMZ3 975 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 TRIM5Q9C035 493 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 CWC25Q9NXE8 425 aaPredicted RBP13.21□□□□□ -0.29
HDAC6-203ENST00000376619 EXOC5O00471 708 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 DHX16O60231 1041 aaKnown RBP13.21□□□□□ -0.29
HDAC6-203ENST00000376619 PTH1RQ03431 593 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 SASS6Q6UVJ0 657 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 SPATA32Q96LK8 384 aa13.21□□□□□ -0.29
HDAC6-203ENST00000376619 STX6O43752 255 aa13.21□□□□□ -0.3
HDAC6-203ENST00000376619 CSPP1Q1MSJ5 1256 aa13.21□□□□□ -0.3
HDAC6-203ENST00000376619 RASEFQ8IZ41 740 aa13.21□□□□□ -0.3
HDAC6-203ENST00000376619 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.3
HDAC6-203ENST00000376619 EVI5LQ96CN4 794 aa13.21□□□□□ -0.3
HDAC6-203ENST00000376619 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 HTATSF1O43719 755 aaKnown RBP13.2□□□□□ -0.3
HDAC6-203ENST00000376619 RAB3GAP1Q15042 981 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 ZSCAN23Q3MJ62 389 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 DNAJC10Q8IXB1 793 aa13.2□□□□□ -0.3
HDAC6-203ENST00000376619 AKAP17AQ02040 695 aaKnown RBP13.2□□□□□ -0.3
HDAC6-203ENST00000376619 IGSF1Q8N6C5 1336 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 MBD3O95983 291 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 GADD45BO75293 160 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-203ENST00000376619 KRT85P78386 507 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
HDAC6-203ENST00000376619 NCOA5Q9HCD5 579 aaKnown RBP13.19□□□□□ -0.3
HDAC6-203ENST00000376619 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 BIN1O00499 593 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 FILIP1Q7Z7B0 1213 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 ARHGEF25Q86VW2 580 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 SNAP23O00161 211 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 TRIM29Q14134 588 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 ADCK5Q3MIX3 580 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 OTUD7BQ6GQQ9 843 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
HDAC6-203ENST00000376619 SNX21Q969T3 373 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 SYNE4Q8N205 404 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
HDAC6-203ENST00000376619 TDO2P48775 406 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 STK38Q15208 465 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 MICU3Q86XE3 530 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-203ENST00000376619 VWDEQ8N2E2 1590 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 HIP1O00291 1037 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-203ENST00000376619 GCKRQ14397 625 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 SIRT1Q96EB6 747 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 TAF5LO75529 589 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 IL2RBP14784 551 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 SYT1P21579 422 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 ASAP1Q9ULH1 1129 aa13.17□□□□□ -0.3
HDAC6-203ENST00000376619 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 NEK1Q96PY6 1258 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 CPS1P31327 1500 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 Q6ZUG5 572 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
HDAC6-203ENST00000376619 PTPRUQ92729 1446 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 HSP90AA2PQ14568 343 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-203ENST00000376619 GLIPR1L2Q4G1C9 344 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 LRRC24Q50LG9 513 aa13.16□□□□□ -0.3
HDAC6-203ENST00000376619 RRAGDQ9NQL2 400 aaPredicted RBP13.16□□□□□ -0.3
HDAC6-203ENST00000376619 PDCP20941 246 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 MIGA1Q8NAN2 632 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 KIAA0232Q92628 1395 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
HDAC6-203ENST00000376619 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
HDAC6-203ENST00000376619 ERICH2A1L162 156 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 SGSM2O43147 1006 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
HDAC6-203ENST00000376619 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
HDAC6-203ENST00000376619 KLHL40Q2TBA0 621 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms