RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
DDR1-227ENST00000376570 CIZ1Q9ULV3 898 aaPredicted RBP13.88□□□□□ -0.19
DDR1-227ENST00000376570 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 KIAA2012Q0VF49 1180 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 STX6O43752 255 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 RBSNQ9H1K0 784 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 PLEKHG1Q9ULL1 1385 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
DDR1-227ENST00000376570 AATKQ6ZMQ8 1374 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 HSP90AA4PQ58FG1 418 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 NUP133Q8WUM0 1156 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 CWC22Q9HCG8 908 aaKnown RBP13.87□□□□□ -0.19
DDR1-227ENST00000376570 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 ATP7BP35670 1465 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 KIAA0232Q92628 1395 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
DDR1-227ENST00000376570 JAK2O60674 1132 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 CHAF1AQ13111 956 aaPredicted RBP13.86□□□□□ -0.19
DDR1-227ENST00000376570 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
DDR1-227ENST00000376570 TMEM94Q12767 1356 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 CPSF1Q10570 1443 aaKnown RBP13.86□□□□□ -0.19
DDR1-227ENST00000376570 BIN1O00499 593 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 CCDC158Q5M9N0 1113 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 SYT1P21579 422 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 ME1P48163 572 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 CREB3L3Q68CJ9 461 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 MPHOSPH8Q99549 860 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 MYO5BQ9ULV0 1848 aa13.86□□□□□ -0.19
DDR1-227ENST00000376570 MYOM1P52179 1685 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 BECN2A8MW95 431 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 TAF5LO75529 589 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 CLCN1P35523 988 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 APOBRQ0VD83 1088 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 GCKRQ14397 625 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 CWC25Q9NXE8 425 aaPredicted RBP13.85□□□□□ -0.19
DDR1-227ENST00000376570 NRXN1Q9ULB1 1477 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 CYP27B1O15528 508 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 PHF14O94880 888 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 ZNF589Q86UQ0 364 aaPredicted RBP13.85□□□□□ -0.19
DDR1-227ENST00000376570 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 PSMA5P28066 241 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 TRDNQ13061 729 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 SSH3Q8TE77 659 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 TAF6LQ9Y6J9 622 aa13.85□□□□□ -0.19
DDR1-227ENST00000376570 SGSM2O43147 1006 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 PHKG2P15735 406 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 IFIT5Q13325 482 aaKnown RBP13.84□□□□□ -0.19
DDR1-227ENST00000376570 ARHGEF10O15013 1369 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 ATP6V1DQ9Y5K8 247 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
DDR1-227ENST00000376570 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 Q6ZUG5 572 aa13.84□□□□□ -0.19
DDR1-227ENST00000376570 SIGLEC1Q9BZZ2 1709 aa13.83□□□□□ -0.19
DDR1-227ENST00000376570 TRIM5Q9C035 493 aa13.83□□□□□ -0.19
DDR1-227ENST00000376570 VWDEQ8N2E2 1590 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 LMTK2Q8IWU2 1503 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 SASH1O94885 1247 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 ZKSCAN3Q9BRR0 538 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
DDR1-227ENST00000376570 CDK12Q9NYV4 1490 aaPredicted RBP13.83□□□□□ -0.2
DDR1-227ENST00000376570 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 GPT2Q8TD30 523 aa13.83□□□□□ -0.2
DDR1-227ENST00000376570 A0A0U1RQG5 324 aaPredicted RBP13.82□□□□□ -0.2
DDR1-227ENST00000376570 HTATSF1O43719 755 aaKnown RBP13.82□□□□□ -0.2
DDR1-227ENST00000376570 MCM2P49736 904 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 MICU3Q86XE3 530 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 PTMSP20962 102 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 GPHNQ9NQX3 736 aaPredicted RBP13.82□□□□□ -0.2
DDR1-227ENST00000376570 LMBRD1Q9NUN5 540 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 MAP2P11137 1827 aaKnown RBP13.82□□□□□ -0.2
DDR1-227ENST00000376570 VPS53Q5VIR6 699 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 FILIP1Q7Z7B0 1213 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 MYL10Q9BUA6 226 aa13.82□□□□□ -0.2
DDR1-227ENST00000376570 RUFY3Q7L099 469 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 ZC3H13Q5T200 1668 aaKnown RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 UQCRHLA0A096LP55 91 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 PES1O00541 588 aaKnown RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 UQCRHP07919 91 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 ADORA1P30542 326 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 COL9A3Q14050 684 aaPredicted RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 TNMDQ9H2S6 317 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 ZNF219Q9P2Y4 722 aaPredicted RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 ERBB3P21860 1342 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 CFAP74Q9C0B2 1584 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 IBTKQ9P2D0 1353 aaPredicted RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 GOLGA6L19H0YKK7 550 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms