RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 CCDC171Q6TFL3 1326 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 ERICH4A6NGS2 130 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 LRMPQ12912 555 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 MAPK8IP2Q13387 824 aaPredicted RBP17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 KRT32Q14532 448 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 CCAR1Q8IX12 1150 aaKnown RBP17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 A0A087WWV3 80 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 TATP17735 454 aaPredicted RBP17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 PTPN14Q15678 1187 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 CEP57L1Q8IYX8 460 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 GLI2P10070 1586 aa17.38■□□□□ 0.37
UBQLN1-202ENST00000376395 KIAA0232Q92628 1395 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 MAP3K5Q99683 1374 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 KCNA6P17658 529 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 CABP4P57796 275 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 PRIMPOLQ96LW4 560 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 IL25Q9H293 177 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 SERPINC1P01008 464 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 HSP90AB3PQ58FF7 597 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 NBPF6Q5VWK0 638 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 KSR2Q6VAB6 950 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 SSH3Q8TE77 659 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 NBPF4Q96M43 638 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 ZBTB3Q9H5J0 574 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
UBQLN1-202ENST00000376395 OSBPL3Q9H4L5 887 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 TNRQ92752 1358 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 IBTKQ9P2D0 1353 aaPredicted RBP17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 RIOK3O14730 519 aaKnown RBP17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 EVA1CP58658 441 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 DDX19AQ9NUU7 478 aaKnown RBP17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 CCDC144CPQ8IYA2 1237 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 CUL4AQ13619 759 aa17.36■□□□□ 0.37
UBQLN1-202ENST00000376395 CEP152O94986 1710 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 HYPKQ9NX55 129 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 PROSER2Q86WR7 435 aaPredicted RBP17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 ANKRD24Q8TF21 1146 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 TPCN1Q9ULQ1 816 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 MTMR6Q9Y217 621 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 SLC27A2O14975 620 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 APOBRQ0VD83 1088 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 TTC6Q86TZ1 520 aa17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 NCOA5Q9HCD5 579 aaKnown RBP17.35■□□□□ 0.37
UBQLN1-202ENST00000376395 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 PYCARDQ9ULZ3 195 aa17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 U2AF2P26368 475 aaKnown RBP eCLIP17.34■□□□□ 0.371e-8■■□□□ 12.4
UBQLN1-202ENST00000376395 SAFBQ15424 915 aaKnown RBP eCLIP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 SEC62Q99442 399 aaKnown RBP17.34■□□□□ 0.37
UBQLN1-202ENST00000376395 A0A0D9SFI3 127 aa17.33■□□□□ 0.37
UBQLN1-202ENST00000376395 OTUD7BQ6GQQ9 843 aa17.33■□□□□ 0.37
UBQLN1-202ENST00000376395 LSG1Q9H089 658 aaKnown RBP17.33■□□□□ 0.37
UBQLN1-202ENST00000376395 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.37
UBQLN1-202ENST00000376395 ABCC3O15438 1527 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 DHX16O60231 1041 aaKnown RBP17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 TFCP2Q12800 502 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 STRN4Q9NRL3 753 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 KIF24Q5T7B8 1368 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 TTC41PQ6P2S7 1318 aa17.33■□□□□ 0.36
UBQLN1-202ENST00000376395 SKILP12757 684 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 EIF4A1P60842 406 aaKnown RBP17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 LINS1Q8NG48 757 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 TRERF1Q96PN7 1200 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 CBX8Q9HC52 389 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 ARGLU1Q9NWB6 273 aaPredicted RBP17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 TIMM10P62072 90 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 MYRIPQ8NFW9 859 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 CFAP100Q494V2 611 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
UBQLN1-202ENST00000376395 TMC6Q7Z403 805 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 AOPEPQ8N6M6 819 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 NPHP3Q7Z494 1330 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 TPM1P09493 284 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
UBQLN1-202ENST00000376395 PPRC1Q5VV67 1664 aaKnown RBP17.3■□□□□ 0.36
UBQLN1-202ENST00000376395 ADGRB3O60242 1522 aa17.3■□□□□ 0.36
UBQLN1-202ENST00000376395 CEP135Q66GS9 1140 aa17.3■□□□□ 0.36
UBQLN1-202ENST00000376395 DBNDD2Q9BQY9 259 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms