RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 NIP7Q9Y221 180 aaKnown RBP eCLIP14.15□□□□□ -0.14
HLA-DQA1-202ENST00000374949 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
HLA-DQA1-202ENST00000374949 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
HLA-DQA1-202ENST00000374949 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
HLA-DQA1-202ENST00000374949 RTF1Q92541 710 aaKnown RBP14.14□□□□□ -0.15
HLA-DQA1-202ENST00000374949 FOXN1O15353 648 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 DUSP27Q5VZP5 1158 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 SNED1Q8TER0 1413 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 COL4A5P29400 1685 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 NUP98P52948 1817 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
HLA-DQA1-202ENST00000374949 KLRG2A4D1S0 409 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 HLFQ16534 295 aa14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 TPTE2Q6XPS3 522 aa14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 LTBP1Q14766 1721 aa14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 IL16Q14005 1332 aa14.12□□□□□ -0.15
HLA-DQA1-202ENST00000374949 EPHX2P34913 555 aa14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 IARSP41252 1262 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 HACL1Q9UJ83 578 aa14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
HLA-DQA1-202ENST00000374949 TMEM88BA6NKF7 163 aa14.1□□□□□ -0.15
HLA-DQA1-202ENST00000374949 ITGBL1O95965 494 aaPredicted RBP14.1□□□□□ -0.15
HLA-DQA1-202ENST00000374949 VEGFBP49765 207 aa14.1□□□□□ -0.15
HLA-DQA1-202ENST00000374949 RTKN2Q8IZC4 609 aa14.1□□□□□ -0.15
HLA-DQA1-202ENST00000374949 MIS18AQ9NYP9 233 aa14.1□□□□□ -0.15
HLA-DQA1-202ENST00000374949 RGL2O15211 777 aa14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 HTATSF1O43719 755 aaKnown RBP14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 MAP1SQ66K74 1059 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 SLC51AQ86UW1 340 aa14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 NUTM1Q86Y26 1132 aa14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 SYNE4Q8N205 404 aa14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 GTF3C3Q9Y5Q9 886 aa14.09□□□□□ -0.15
HLA-DQA1-202ENST00000374949 AIDAQ96BJ3 306 aa14.08□□□□□ -0.16
HLA-DQA1-202ENST00000374949 RCAN3Q9UKA8 241 aa14.08□□□□□ -0.16
HLA-DQA1-202ENST00000374949 THSD7BQ9C0I4 1608 aa14.08□□□□□ -0.16
HLA-DQA1-202ENST00000374949 FZD9O00144 591 aa14.07□□□□□ -0.16
HLA-DQA1-202ENST00000374949 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
HLA-DQA1-202ENST00000374949 CRY2Q49AN0 593 aa14.07□□□□□ -0.16
HLA-DQA1-202ENST00000374949 GPC2Q8N158 579 aa14.07□□□□□ -0.16
HLA-DQA1-202ENST00000374949 RIC1Q4ADV7 1423 aa14.07□□□□□ -0.16
HLA-DQA1-202ENST00000374949 NEFLP07196 543 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 GPTP24298 496 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 GNAI1P63096 354 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 TAF7Q15545 349 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 PNMA8AQ86V59 439 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 PSMD1Q99460 953 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 PRDM10Q9NQV6 1147 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 GJA3Q9Y6H8 435 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 UBN2Q6ZU65 1347 aa14.06□□□□□ -0.16
HLA-DQA1-202ENST00000374949 KIF6Q6ZMV9 814 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 TTLL7Q6ZT98 887 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 JDP2Q8WYK2 163 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 NYXQ9GZU5 481 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 WBP1LQ9NX94 342 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 ABT1Q9ULW3 272 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 LAS1LQ9Y4W2 734 aaKnown RBP14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 MAP3K15Q6ZN16 1313 aa14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 IBTKQ9P2D0 1353 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQA1-202ENST00000374949 TRPM7Q96QT4 1865 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 RASSF10A6NK89 507 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 MYL6BP14649 208 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 LBX1P52954 281 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 CFAP44Q96MT7 982 aa14.04□□□□□ -0.16
HLA-DQA1-202ENST00000374949 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 LMOD1P29536 600 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 EIF6P56537 245 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 FMR1Q06787 632 aaKnown RBP eCLIP14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 SUSD4Q5VX71 490 aa14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 C3orf67Q6ZVT6 689 aa14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 TSR2Q969E8 191 aaKnown RBP14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 LAMB2P55268 1798 aa14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
HLA-DQA1-202ENST00000374949 FANCIQ9NVI1 1328 aa14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 ERVV-1B6SEH8 477 aa14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 PPEF1O14829 653 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CT47B1P0C2W7 299 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 HSPA8P11142 646 aaKnown RBP14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 SCNN1DP51172 638 aa14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 EIF4A1P60842 406 aaKnown RBP14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 DEFB115Q30KQ5 88 aa14.02□□□□□ -0.17
HLA-DQA1-202ENST00000374949 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 NTSR2O95665 410 aa14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 HOXA10P31260 410 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 EPS15P42566 896 aa14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 EXOSC9Q06265 439 aaKnown RBP14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
HLA-DQA1-202ENST00000374949 PAXIP1Q6ZW49 1069 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms