RNA–Protein interactions for RNA: ENST00000374866.7

COL5A2-201, Transcript of collagen type V alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A2, Length 6,949 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2-201ENST00000374866 FOXO3O43524 673 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 PAFAH1B1P43034 410 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 CCDC50Q8IVM0 306 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 USP25Q9UHP3 1055 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 NDC80O14777 642 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 RAB11FIP3O75154 756 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 YEATS4O95619 227 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 KRT13P13646 458 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 TAF12Q16514 161 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 CCDC174Q6PII3 467 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 GJB2P29033 226 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 FLIIQ13045 1269 aa12.9□□□□□ -0.34
COL5A2-201ENST00000374866 CSPG5O95196 566 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 PPP2R5CQ13362 524 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 DDX46Q7L014 1031 aaKnown RBP12.89□□□□□ -0.35
COL5A2-201ENST00000374866 UTP14AQ9BVJ6 771 aaKnown RBP12.89□□□□□ -0.35
COL5A2-201ENST00000374866 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 MRRFQ96E11 262 aaKnown RBP12.89□□□□□ -0.35
COL5A2-201ENST00000374866 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 TSPY3P0CV98 308 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 TSPY8P0CW00 308 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 SSFA2P28290 1259 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
COL5A2-201ENST00000374866 IRX5P78411 483 aaPredicted RBP12.89□□□□□ -0.35
COL5A2-201ENST00000374866 ANO10Q9NW15 660 aa12.89□□□□□ -0.35
COL5A2-201ENST00000374866 KIF1BPQ96EK5 621 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 FGFR1OPO95684 399 aaKnown RBP12.88□□□□□ -0.35
COL5A2-201ENST00000374866 HARSP12081 509 aaKnown RBP12.88□□□□□ -0.35
COL5A2-201ENST00000374866 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 ZSCAN12O43309 604 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 EXOC1Q9NV70 894 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 USP16Q9Y5T5 823 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 ST5P78524 1137 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 TCP11L1Q9NUJ3 509 aa12.88□□□□□ -0.35
COL5A2-201ENST00000374866 ERCC5P28715 1186 aaPredicted RBP12.87□□□□□ -0.35
COL5A2-201ENST00000374866 TCHPQ9BT92 498 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 TBCAO75347 108 aaKnown RBP12.87□□□□□ -0.35
COL5A2-201ENST00000374866 NME9Q86XW9 330 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 TAOK3Q9H2K8 898 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 CETN1Q12798 172 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 RASA3Q14644 834 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 CHST3Q7LGC8 479 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 TRIM47Q96LD4 638 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
COL5A2-201ENST00000374866 CAPZA3Q96KX2 299 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 FBLN1P23142 703 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
COL5A2-201ENST00000374866 HLA-DOAP06340 250 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 ACTN2P35609 894 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 METAP2P50579 478 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 MFSD6Q6ZSS7 791 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 NAIPQ13075 1403 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 EXOC5O00471 708 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 FAM160A1Q05DH4 1040 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 LDHAL6AQ6ZMR3 332 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 LAMC3Q9Y6N6 1575 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 TCEANC2Q96MN5 208 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 BRD4O60885 1362 aaPredicted RBP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 STX6O43752 255 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 PRKG1Q13976 671 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 ODF2LQ9ULJ1 636 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 TPD52P55327 224 aaPredicted RBP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 NBPF5PQ86XG9 351 aaPredicted RBP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 TBC1D5Q92609 795 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 ZHX1Q9UKY1 873 aaPredicted RBP12.86□□□□□ -0.35
COL5A2-201ENST00000374866 NSD3Q9BZ95 1437 aa12.86□□□□□ -0.35
COL5A2-201ENST00000374866 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CEBPAP49715 358 aaPredicted RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CGNQ9P2M7 1197 aaKnown RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 ANKRD50Q9ULJ7 1429 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 RRAGBQ5VZM2 374 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CFTRP13569 1480 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 DNMBPQ6XZF7 1577 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 PPP2R5DQ14738 602 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 DNAJC21Q5F1R6 531 aaKnown RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 SPATA24Q86W54 205 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 FBF1Q8TES7 1133 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 MYOM3Q5VTT5 1437 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 MCM4P33991 863 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 UAP1Q16222 522 aaPredicted RBP12.85□□□□□ -0.35
COL5A2-201ENST00000374866 CCDC25Q86WR0 208 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
COL5A2-201ENST00000374866 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms