RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TTLL6Q8N841 843 aa15.42■□□□□ 0.06
HDAC8-201ENST00000373554 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
HDAC8-201ENST00000373554 UTRNP46939 3433 aa15.41■□□□□ 0.06
HDAC8-201ENST00000373554 CEP350Q5VT06 3117 aa15.41■□□□□ 0.06
HDAC8-201ENST00000373554 SRGNP10124 158 aa15.41■□□□□ 0.06
HDAC8-201ENST00000373554 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
HDAC8-201ENST00000373554 MASTLQ96GX5 879 aa15.41■□□□□ 0.06
HDAC8-201ENST00000373554 SLC34A2O95436 690 aa15.4■□□□□ 0.06
HDAC8-201ENST00000373554 NPR1P16066 1061 aa15.4■□□□□ 0.06
HDAC8-201ENST00000373554 CNKSR1Q969H4 720 aa15.4■□□□□ 0.06
HDAC8-201ENST00000373554 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
HDAC8-201ENST00000373554 SH3TC1Q8TE82 1336 aa15.4■□□□□ 0.06
HDAC8-201ENST00000373554 KLRG2A4D1S0 409 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-201ENST00000373554 ATP5J2-PTCD1G3V325 749 aa15.39■□□□□ 0.05
HDAC8-201ENST00000373554 SLFN5Q08AF3 891 aa15.39■□□□□ 0.05
HDAC8-201ENST00000373554 ARHGAP27Q6ZUM4 889 aa15.39■□□□□ 0.05
HDAC8-201ENST00000373554 ZNF784Q8NCA9 323 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-201ENST00000373554 ISCA1Q9BUE6 129 aa15.39■□□□□ 0.05
HDAC8-201ENST00000373554 FLIIQ13045 1269 aa15.38■□□□□ 0.05
HDAC8-201ENST00000373554 FKBP5Q13451 457 aaPredicted RBP15.38■□□□□ 0.05
HDAC8-201ENST00000373554 CRY2Q49AN0 593 aa15.38■□□□□ 0.05
HDAC8-201ENST00000373554 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
HDAC8-201ENST00000373554 MYD88Q99836 296 aa15.38■□□□□ 0.05
HDAC8-201ENST00000373554 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
HDAC8-201ENST00000373554 PI4KAP2A4QPH2 592 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 TRIM28Q13263 835 aaKnown RBP15.37■□□□□ 0.05
HDAC8-201ENST00000373554 PRPF40BQ6NWY9 871 aaKnown RBP15.37■□□□□ 0.05
HDAC8-201ENST00000373554 G2E3Q7L622 706 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 PI4KAP1Q8N8J0 262 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 RPGRQ92834 1020 aaKnown RBP15.37■□□□□ 0.05
HDAC8-201ENST00000373554 CDCA7LQ96GN5 454 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 NLRP3Q96P20 1036 aa15.37■□□□□ 0.05
HDAC8-201ENST00000373554 METTL22Q9BUU2 404 aaPredicted RBP15.37■□□□□ 0.05
HDAC8-201ENST00000373554 ADCY9O60503 1353 aa15.36■□□□□ 0.05
HDAC8-201ENST00000373554 HNRNPUQ00839 825 aaKnown RBP eCLIP15.36■□□□□ 0.05
HDAC8-201ENST00000373554 SLC10A5Q5PT55 438 aa15.36■□□□□ 0.05
HDAC8-201ENST00000373554 CCDC191Q8NCU4 936 aa15.36■□□□□ 0.05
HDAC8-201ENST00000373554 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
HDAC8-201ENST00000373554 CACNA1SQ13698 1873 aa15.35■□□□□ 0.05
HDAC8-201ENST00000373554 ALDH1B1P30837 517 aa15.35■□□□□ 0.05
HDAC8-201ENST00000373554 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
HDAC8-201ENST00000373554 ZNF428Q96B54 188 aa15.35■□□□□ 0.05
HDAC8-201ENST00000373554 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-201ENST00000373554 ZNF219Q9P2Y4 722 aaPredicted RBP15.35■□□□□ 0.05
HDAC8-201ENST00000373554 C21orf2O43822 256 aa15.34■□□□□ 0.05
HDAC8-201ENST00000373554 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
HDAC8-201ENST00000373554 FAM89AQ96GI7 184 aa15.34■□□□□ 0.05
HDAC8-201ENST00000373554 RBM17Q96I25 401 aaKnown RBP15.34■□□□□ 0.05
HDAC8-201ENST00000373554 HSP90B1P14625 803 aaKnown RBP15.33■□□□□ 0.04
HDAC8-201ENST00000373554 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
HDAC8-201ENST00000373554 C3orf67Q6ZVT6 689 aa15.33■□□□□ 0.04
HDAC8-201ENST00000373554 TRMT2AQ8IZ69 625 aaKnown RBP15.33■□□□□ 0.04
HDAC8-201ENST00000373554 SYNE4Q8N205 404 aa15.33■□□□□ 0.04
HDAC8-201ENST00000373554 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
HDAC8-201ENST00000373554 DNAAF4Q8WXU2 420 aa15.33■□□□□ 0.04
HDAC8-201ENST00000373554 LAMB2P55268 1798 aa15.33■□□□□ 0.04
HDAC8-201ENST00000373554 SLX4Q8IY92 1834 aa15.33■□□□□ 0.04
HDAC8-201ENST00000373554 DDX60Q8IY21 1712 aaKnown RBP15.32■□□□□ 0.04
HDAC8-201ENST00000373554 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-201ENST00000373554 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
HDAC8-201ENST00000373554 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
HDAC8-201ENST00000373554 CRAMP1Q96RY5 1269 aa15.32■□□□□ 0.04
HDAC8-201ENST00000373554 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-201ENST00000373554 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
HDAC8-201ENST00000373554 IGKV5-2P06315 115 aa15.31■□□□□ 0.04
HDAC8-201ENST00000373554 RASSF7Q02833 373 aa15.31■□□□□ 0.04
HDAC8-201ENST00000373554 NEURL1BA8MQ27 555 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 NFKBIEO00221 500 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
HDAC8-201ENST00000373554 C9orf131Q5VYM1 1079 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
HDAC8-201ENST00000373554 LINS1Q8NG48 757 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 TAOK3Q9H2K8 898 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 RNF181Q9P0P0 153 aa15.3■□□□□ 0.04
HDAC8-201ENST00000373554 CDHR2Q9BYE9 1310 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-201ENST00000373554 LMNB1P20700 586 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 C7orf43Q8WVR3 580 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 TMX4Q9H1E5 349 aaPredicted RBP15.29■□□□□ 0.04
HDAC8-201ENST00000373554 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 FER1L6Q2WGJ9 1857 aa15.29■□□□□ 0.04
HDAC8-201ENST00000373554 ABCC4O15439 1325 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 F6X3S4 739 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
HDAC8-201ENST00000373554 CC2D2BQ6DHV5 1058 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 RTKN2Q8IZC4 609 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
HDAC8-201ENST00000373554 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
HDAC8-201ENST00000373554 PTPRCP08575 1304 aa15.27■□□□□ 0.04
HDAC8-201ENST00000373554 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
HDAC8-201ENST00000373554 PDE8AO60658 829 aa15.27■□□□□ 0.04
HDAC8-201ENST00000373554 GRAPQ13588 217 aa15.27■□□□□ 0.04
HDAC8-201ENST00000373554 GCKRQ14397 625 aa15.27■□□□□ 0.04
HDAC8-201ENST00000373554 GRAPLQ8TC17 118 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms