RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SYT17Q9BSW7 474 aa23.59■■□□□ 1.37
CDX4-201ENST00000373514 NOB1Q9ULX3 412 aaKnown RBP23.59■■□□□ 1.37
CDX4-201ENST00000373514 PTPRCP08575 1304 aa23.59■■□□□ 1.37
CDX4-201ENST00000373514 ERFEQ4G0M1 354 aa23.59■■□□□ 1.37
CDX4-201ENST00000373514 PARP10Q53GL7 1025 aa23.59■■□□□ 1.37
CDX4-201ENST00000373514 SYNE4Q8N205 404 aa23.58■■□□□ 1.36
CDX4-201ENST00000373514 BRPF1P55201 1214 aaPredicted RBP23.57■■□□□ 1.36
CDX4-201ENST00000373514 ST5P78524 1137 aa23.57■■□□□ 1.36
CDX4-201ENST00000373514 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
CDX4-201ENST00000373514 UTP14AQ9BVJ6 771 aaKnown RBP23.57■■□□□ 1.36
CDX4-201ENST00000373514 TNNQ9UQP3 1299 aa23.57■■□□□ 1.36
CDX4-201ENST00000373514 CD2APQ9Y5K6 639 aa23.57■■□□□ 1.36
CDX4-201ENST00000373514 TAF1P21675 1872 aa23.57■■□□□ 1.36
CDX4-201ENST00000373514 KIF16BQ96L93 1317 aa23.56■■□□□ 1.36
CDX4-201ENST00000373514 SLC4A10Q6U841 1118 aa23.56■■□□□ 1.36
CDX4-201ENST00000373514 TPTE2Q6XPS3 522 aa23.56■■□□□ 1.36
CDX4-201ENST00000373514 NYXQ9GZU5 481 aa23.56■■□□□ 1.36
CDX4-201ENST00000373514 NEURL1BA8MQ27 555 aa23.55■■□□□ 1.36
CDX4-201ENST00000373514 NEXNQ0ZGT2 675 aa23.55■■□□□ 1.36
CDX4-201ENST00000373514 RTL5Q5HYW3 569 aaPredicted RBP23.55■■□□□ 1.36
CDX4-201ENST00000373514 JARID2Q92833 1246 aaPredicted RBP23.55■■□□□ 1.36
CDX4-201ENST00000373514 FRAT1Q92837 279 aaPredicted RBP23.55■■□□□ 1.36
CDX4-201ENST00000373514 TRMT112Q9UI30 125 aaKnown RBP23.55■■□□□ 1.36
CDX4-201ENST00000373514 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
CDX4-201ENST00000373514 CHRNA5P30532 468 aa23.54■■□□□ 1.36
CDX4-201ENST00000373514 BEND3Q5T5X7 828 aa23.54■■□□□ 1.36
CDX4-201ENST00000373514 WWC3Q9ULE0 1092 aa23.54■■□□□ 1.36
CDX4-201ENST00000373514 TRIM28Q13263 835 aaKnown RBP23.54■■□□□ 1.36
CDX4-201ENST00000373514 CWC25Q9NXE8 425 aaPredicted RBP23.54■■□□□ 1.36
CDX4-201ENST00000373514 RIC1Q4ADV7 1423 aa23.53■■□□□ 1.36
CDX4-201ENST00000373514 DPEP1P16444 411 aa23.53■■□□□ 1.36
CDX4-201ENST00000373514 CCDC191Q8NCU4 936 aa23.53■■□□□ 1.36
CDX4-201ENST00000373514 FAM89AQ96GI7 184 aa23.53■■□□□ 1.36
CDX4-201ENST00000373514 SPEF2Q9C093 1822 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 ARFGEF1Q9Y6D6 1849 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 A0A0G2JLW4 131 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 C3orf67Q6ZVT6 689 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 LINS1Q8NG48 757 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 RCAN3Q9UKA8 241 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 SH3TC1Q8TE82 1336 aa23.52■■□□□ 1.36
CDX4-201ENST00000373514 BRIP1Q9BX63 1249 aa23.51■■□□□ 1.35
CDX4-201ENST00000373514 COL4A1P02462 1669 aa23.51■■□□□ 1.35
CDX4-201ENST00000373514 HCLS1P14317 486 aaPredicted RBP23.5■■□□□ 1.35
CDX4-201ENST00000373514 TRIM27P14373 513 aa23.5■■□□□ 1.35
CDX4-201ENST00000373514 GCKRQ14397 625 aa23.5■■□□□ 1.35
CDX4-201ENST00000373514 RNF123Q5XPI4 1314 aa23.5■■□□□ 1.35
CDX4-201ENST00000373514 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
CDX4-201ENST00000373514 API5Q9BZZ5 524 aaKnown RBP23.49■■□□□ 1.35
CDX4-201ENST00000373514 SUPT16HQ9Y5B9 1047 aaKnown RBP23.49■■□□□ 1.35
CDX4-201ENST00000373514 GTF3C3Q9Y5Q9 886 aa23.49■■□□□ 1.35
CDX4-201ENST00000373514 SLX4Q8IY92 1834 aa23.49■■□□□ 1.35
CDX4-201ENST00000373514 PCCAP05165 728 aaPredicted RBP23.49■■□□□ 1.35
CDX4-201ENST00000373514 TGFB2P61812 414 aa23.49■■□□□ 1.35
CDX4-201ENST00000373514 ZBTB38Q8NAP3 1195 aaPredicted RBP23.49■■□□□ 1.35
CDX4-201ENST00000373514 ABCC4O15439 1325 aa23.48■■□□□ 1.35
CDX4-201ENST00000373514 KCNA3P22001 575 aa23.48■■□□□ 1.35
CDX4-201ENST00000373514 CLUAP1Q96AJ1 413 aa23.48■■□□□ 1.35
CDX4-201ENST00000373514 SRCIN1Q9C0H9 1055 aa23.48■■□□□ 1.35
CDX4-201ENST00000373514 PDE6BP35913 854 aa23.47■■□□□ 1.35
CDX4-201ENST00000373514 ATF7IPQ6VMQ6 1270 aa23.47■■□□□ 1.35
CDX4-201ENST00000373514 UBE3BQ7Z3V4 1068 aa23.47■■□□□ 1.35
CDX4-201ENST00000373514 ARHGAP45Q92619 1136 aa23.47■■□□□ 1.35
CDX4-201ENST00000373514 IRS4O14654 1257 aaPredicted RBP23.46■■□□□ 1.35
CDX4-201ENST00000373514 ZKSCAN2Q63HK3 967 aa23.46■■□□□ 1.35
CDX4-201ENST00000373514 ALDH1L1O75891 902 aa23.45■■□□□ 1.34
CDX4-201ENST00000373514 SLC10A5Q5PT55 438 aa23.45■■□□□ 1.34
CDX4-201ENST00000373514 CDHR2Q9BYE9 1310 aa23.44■■□□□ 1.34
CDX4-201ENST00000373514 H0YIN7 160 aa23.44■■□□□ 1.34
CDX4-201ENST00000373514 PLIN1O60240 522 aa23.44■■□□□ 1.34
CDX4-201ENST00000373514 CASP7P55210 303 aa23.44■■□□□ 1.34
CDX4-201ENST00000373514 KLRG2A4D1S0 409 aaPredicted RBP23.43■■□□□ 1.34
CDX4-201ENST00000373514 H7C1W4 665 aa23.43■■□□□ 1.34
CDX4-201ENST00000373514 IPO8O15397 1037 aaKnown RBP23.43■■□□□ 1.34
CDX4-201ENST00000373514 SRGNP10124 158 aa23.43■■□□□ 1.34
CDX4-201ENST00000373514 CRY2Q49AN0 593 aa23.43■■□□□ 1.34
CDX4-201ENST00000373514 PELP1Q8IZL8 1130 aaKnown RBP23.43■■□□□ 1.34
CDX4-201ENST00000373514 RLBP1P12271 317 aa23.42■■□□□ 1.34
CDX4-201ENST00000373514 ZNF622Q969S3 477 aaKnown RBP eCLIP23.42■■□□□ 1.34
CDX4-201ENST00000373514 GRM8O00222 908 aa23.41■■□□□ 1.34
CDX4-201ENST00000373514 NBPF7P0C2Y1 421 aaPredicted RBP23.41■■□□□ 1.34
CDX4-201ENST00000373514 NLRP3Q96P20 1036 aa23.41■■□□□ 1.34
CDX4-201ENST00000373514 GOLGB1Q14789 3259 aaKnown RBP23.4■■□□□ 1.34
CDX4-201ENST00000373514 LRRC37AA6NMS7 1700 aa23.4■■□□□ 1.34
CDX4-201ENST00000373514 YBX3P16989 372 aaKnown RBP eCLIP23.4■■□□□ 1.34
CDX4-201ENST00000373514 CCT4P50991 539 aaKnown RBP23.4■■□□□ 1.34
CDX4-201ENST00000373514 TMEM57Q8N5G2 664 aa23.4■■□□□ 1.34
CDX4-201ENST00000373514 MASTLQ96GX5 879 aa23.4■■□□□ 1.34
CDX4-201ENST00000373514 PIM2Q9P1W9 311 aa23.4■■□□□ 1.34
CDX4-201ENST00000373514 INTS3Q68E01 1043 aaKnown RBP23.39■■□□□ 1.34
CDX4-201ENST00000373514 SLC51AQ86UW1 340 aa23.39■■□□□ 1.34
CDX4-201ENST00000373514 CCDC85AQ96PX6 553 aaPredicted RBP23.39■■□□□ 1.34
CDX4-201ENST00000373514 C9orf78Q9NZ63 289 aaPredicted RBP23.39■■□□□ 1.34
CDX4-201ENST00000373514 PDE8AO60658 829 aa23.38■■□□□ 1.33
CDX4-201ENST00000373514 NPR1P16066 1061 aa23.38■■□□□ 1.33
CDX4-201ENST00000373514 RPGRQ92834 1020 aaKnown RBP23.38■■□□□ 1.33
CDX4-201ENST00000373514 BCS1LQ9Y276 419 aa23.38■■□□□ 1.33
CDX4-201ENST00000373514 NEFLP07196 543 aa23.38■■□□□ 1.33
CDX4-201ENST00000373514 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
CDX4-201ENST00000373514 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
CDX4-201ENST00000373514 DZIP1LQ8IYY4 767 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms