RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 TTC12Q9H892 705 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 PAIP2BQ9ULR5 123 aaKnown RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 JRKLQ9Y4A0 524 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 SELENOOQ9BVL4 669 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 PPFIA4O75335 1185 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 CUX1P39880 1505 aa8.03□□□□□ -1.12
CSMD2-206ENST00000373388 GFM2Q969S9 779 aaKnown RBP8.03□□□□□ -1.12
CSMD2-206ENST00000373388 KIAA0753Q2KHM9 967 aa8.02□□□□□ -1.12
CSMD2-206ENST00000373388 CAPZA3Q96KX2 299 aa8.02□□□□□ -1.12
CSMD2-206ENST00000373388 ODF2LQ9ULJ1 636 aa8.02□□□□□ -1.12
CSMD2-206ENST00000373388 CHMP2AO43633 222 aa8.02□□□□□ -1.12
CSMD2-206ENST00000373388 DYNC1I2Q13409 638 aaKnown RBP8.02□□□□□ -1.12
CSMD2-206ENST00000373388 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 ITGB1BP2Q9UKP3 347 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 EVI5O60447 810 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 EIF2S2P20042 333 aaKnown RBP8.02□□□□□ -1.13
CSMD2-206ENST00000373388 ARMC9Q7Z3E5 817 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 GTF3C6Q969F1 213 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 CCDC68Q9H2F9 335 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PRC1O43663 620 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 FYB2Q5VWT5 728 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 TRMT1Q9NXH9 659 aaKnown RBP8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PDZRN3Q9UPQ7 1066 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PCYT1AP49585 367 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 ZEB2O60315 1214 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 RUFY4Q6ZNE9 571 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 RAD21O60216 631 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 MUM1Q2TAK8 710 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PEX19P40855 299 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PSMC4P43686 418 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 NGDNQ8NEJ9 315 aaKnown RBP8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 ATP2C2O75185 946 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 KLHDC4Q8TBB5 520 aa8.02□□□□□ -1.13
CSMD2-206ENST00000373388 PRDM2Q13029 1718 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 KRT86O43790 486 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 CNGA1P29973 690 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 SPAG1Q07617 926 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 MRFAP1L1Q96HT8 127 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 SLC4A8Q2Y0W8 1093 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 MMS22LQ6ZRQ5 1243 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 FSD1Q9BTV5 496 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 SEPT2Q15019 361 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 PDE1CQ14123 709 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 CLUL1Q15846 466 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 RPGRIP1Q96KN7 1286 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 JAKMIP1Q96N16 626 aaKnown RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 GFAPP14136 432 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 TRIM6Q9C030 488 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 KIF5AQ12840 1032 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 NACADO15069 1562 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 TRHP20396 242 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 TPD52P55327 224 aaPredicted RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
CSMD2-206ENST00000373388 KIAA1524Q8TCG1 905 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 NKIRAS1Q9NYS0 192 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 NUCB1Q02818 461 aa8.01□□□□□ -1.13
CSMD2-206ENST00000373388 ACTN2P35609 894 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 MTRF1LQ9UGC7 380 aaKnown RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 MCTP2Q6DN12 878 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 CENPKQ9BS16 269 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 CNKSR2Q8WXI2 1034 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 TSG101Q99816 390 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 CYLC1P35663 651 aaPredicted RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 CCDC152Q4G0S7 254 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 ANKRD24Q8TF21 1146 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 PPP1R1BQ9UD71 204 aaPredicted RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 TPX2Q9ULW0 747 aaKnown RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 PPP2R3AQ06190 1150 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 NAA16Q6N069 864 aaPredicted RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 DNAI1Q9UI46 699 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 MROH2BQ7Z745 1585 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 G3V3G9 751 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 MAN1A2O60476 641 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 KRT83P78385 493 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 DCAF8Q5TAQ9 597 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 STAG1Q8WVM7 1258 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 TNNC1P63316 161 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 SMC1BQ8NDV3 1235 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 ATP2A2P16615 1042 aaKnown RBP8□□□□□ -1.13
CSMD2-206ENST00000373388 DRC3Q9H069 523 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 SESN3P58005 492 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 CAMK4Q16566 473 aa8□□□□□ -1.13
CSMD2-206ENST00000373388 BAG4O95429 457 aaKnown RBP7.99□□□□□ -1.13
CSMD2-206ENST00000373388 ZNF131P52739 623 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 CETN1Q12798 172 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 TAOK1Q7L7X3 1001 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 RAPGEF2Q9Y4G8 1499 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 CHMP4BP1P59074 171 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 CEBPZQ03701 1054 aaKnown RBP7.99□□□□□ -1.13
CSMD2-206ENST00000373388 UBTFL1P0CB47 393 aaPredicted RBP7.99□□□□□ -1.13
CSMD2-206ENST00000373388 BLOC1S2Q6QNY1 142 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 LMBR1Q8WVP7 490 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 HDAC9Q9UKV0 1011 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 GOLGA6BA6NDN3 693 aa7.99□□□□□ -1.13
CSMD2-206ENST00000373388 BRD3Q15059 726 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms