RNA–Protein interactions for RNA: ENST00000372930.4

TMEM35A-201, Transcript of transmembrane protein 35A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM35A, Length 2,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35A-201ENST00000372930 PHC3Q8NDX5 983 aa11.16□□□□□ -0.62
TMEM35A-201ENST00000372930 SNRNP27Q8WVK2 155 aaKnown RBP11.16□□□□□ -0.62
TMEM35A-201ENST00000372930 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.16□□□□□ -0.62
TMEM35A-201ENST00000372930 LCMT1Q9UIC8 334 aa11.16□□□□□ -0.62
TMEM35A-201ENST00000372930 PNMA2Q9UL42 364 aa11.16□□□□□ -0.62
TMEM35A-201ENST00000372930 RWDD2BP57060 319 aa11.15□□□□□ -0.62
TMEM35A-201ENST00000372930 SYCP1Q15431 976 aa11.15□□□□□ -0.62
TMEM35A-201ENST00000372930 NCAPG2Q86XI2 1143 aa11.15□□□□□ -0.62
TMEM35A-201ENST00000372930 KIF18AQ8NI77 898 aa11.15□□□□□ -0.62
TMEM35A-201ENST00000372930 EXOC6Q8TAG9 804 aa11.15□□□□□ -0.62
TMEM35A-201ENST00000372930 PTCH1Q13635 1447 aa11.15□□□□□ -0.63
TMEM35A-201ENST00000372930 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 PIK3R4Q99570 1358 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 FYB1O15117 783 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 C21orf2O43822 256 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 ALDH1B1P30837 517 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 SRLQ86TD4 932 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 AGAP3Q96P47 875 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
TMEM35A-201ENST00000372930 EXOC5O00471 708 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 ECM2O94769 699 aaPredicted RBP11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 SLC5A9Q2M3M2 681 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 MIEF2Q96C03 454 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 SH3GL3Q99963 347 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 ARHGEF10LQ9HCE6 1279 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 MAGEA9P43362 315 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 TBC1D8BQ0IIM8 1120 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 TACO1Q9BSH4 297 aaKnown RBP11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 IRF2BPLQ9H1B7 796 aa11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
TMEM35A-201ENST00000372930 ATP7BP35670 1465 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 NEBLO76041 1014 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 SKOR2Q2VWA4 1001 aaPredicted RBP11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 C16orf87Q6PH81 154 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
TMEM35A-201ENST00000372930 IMPDH2P12268 514 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 TMCO4Q5TGY1 634 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 KCNV1Q6PIU1 500 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 MYLK4Q86YV6 388 aaPredicted RBP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 FMNL3Q8IVF7 1028 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 XRN1Q8IZH2 1706 aaKnown RBP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 SMC2O95347 1197 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 MTHFSP49914 203 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 RABEP1Q15276 862 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 USP19O94966 1318 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 NSD2O96028 1365 aa11.11□□□□□ -0.63
TMEM35A-201ENST00000372930 CPSF1Q10570 1443 aaKnown RBP11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 CDKL5O76039 1030 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 TPM1P09493 284 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 WDR78Q5VTH9 848 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 EFCAB13Q8IY85 973 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 C17orf50Q8WW18 174 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 YIPF2Q9BWQ6 316 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 CHMP5Q9NZZ3 219 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 RRP15Q9Y3B9 282 aaKnown RBP11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 FLT3P36888 993 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 NME9Q86XW9 330 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 RBM12BQ8IXT5 1001 aaKnown RBP11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 ACEP12821 1306 aa11.1□□□□□ -0.63
TMEM35A-201ENST00000372930 ADGRB2O60241 1585 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 FBLN1P23142 703 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 GRIK3Q13003 919 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 ZFYVE27Q5T4F4 411 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 TDRD7Q8NHU6 1098 aaKnown RBP11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 ZRANB1Q9UGI0 708 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 FCHSD2O94868 740 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 IGHDP01880 384 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 NAT2P11245 290 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 PEX19P40855 299 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 TSNAXIP1Q2TAA8 658 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 CCDC191Q8NCU4 936 aa11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 ZNF483Q8TF39 744 aaPredicted RBP11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 UTP6Q9NYH9 597 aaKnown RBP11.09□□□□□ -0.63
TMEM35A-201ENST00000372930 PLEKHG3A1L390 1219 aa11.08□□□□□ -0.64
TMEM35A-201ENST00000372930 PEX14O75381 377 aa11.08□□□□□ -0.64
TMEM35A-201ENST00000372930 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
TMEM35A-201ENST00000372930 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms