RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 NYAP1Q6ZVC0 841 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 TATDN2Q93075 761 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 ARHGEF5Q12774 1597 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 MAFGO15525 162 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 ATP8B1O43520 1251 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 C21orf2O43822 256 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 ZNF75DP51815 510 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 NEK4P51957 841 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 NUCB1Q02818 461 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 NAA25Q14CX7 972 aa12.4□□□□□ -0.43
TRERF1-203ENST00000372917 CAMK4Q16566 473 aa12.4□□□□□ -0.43
TRERF1-203ENST00000372917 CCDC27Q2M243 656 aa12.4□□□□□ -0.43
TRERF1-203ENST00000372917 ZNF483Q8TF39 744 aaPredicted RBP12.4□□□□□ -0.43
TRERF1-203ENST00000372917 KIF9Q9HAQ2 790 aa12.4□□□□□ -0.43
TRERF1-203ENST00000372917 TRAF1Q13077 416 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CCDC96Q2M329 555 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 C1QTNF12Q5T7M4 302 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CC2D1AQ6P1N0 951 aaPredicted RBP12.39□□□□□ -0.43
TRERF1-203ENST00000372917 KCNV1Q6PIU1 500 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 GOPCQ9HD26 462 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 SYNJ2O15056 1496 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 URI1O94763 535 aaPredicted RBP12.39□□□□□ -0.43
TRERF1-203ENST00000372917 ZBTB10Q96DT7 871 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 ELP1O95163 1332 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CDC42BPAQ5VT25 1732 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 MTHFSP49914 203 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 EVCP57679 992 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 LRRC8AQ8IWT6 810 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 TMX3Q96JJ7 454 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 PUS7Q96PZ0 661 aaKnown RBP12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CENPHQ9H3R5 247 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CD248Q9HCU0 757 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 ABCC10Q5T3U5 1492 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 SYNMO15061 1565 aa12.39□□□□□ -0.43
TRERF1-203ENST00000372917 CCP110O43303 1012 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 TMEM132EQ6IEE7 984 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 KCNB2Q92953 911 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 ACBD3Q9H3P7 528 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 A0A1B0GUA9 196 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 ANKRD33BA6NCL7 494 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 UBE2HP62256 183 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 TSR2Q969E8 191 aaKnown RBP12.38□□□□□ -0.43
TRERF1-203ENST00000372917 CCDC102AQ96A19 550 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
TRERF1-203ENST00000372917 CARD6Q9BX69 1037 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 UBXN6Q9BZV1 441 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 KDM4CQ9H3R0 1056 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 BICC1Q9H694 974 aaKnown RBP12.38□□□□□ -0.43
TRERF1-203ENST00000372917 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
TRERF1-203ENST00000372917 COQ9O75208 318 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 MCM2P49736 904 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 HSP90B2PQ58FF3 399 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 ATP10BO94823 1461 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 CCDC69A6NI79 296 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 MFSD4BQ5TF39 518 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 ANKRD23Q86SG2 305 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 AFAP1Q8N556 730 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 POLR3AO14802 1390 aaPredicted RBP12.37□□□□□ -0.43
TRERF1-203ENST00000372917 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 CKAP2LQ8IYA6 745 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 DNAI1Q9UI46 699 aa12.37□□□□□ -0.43
TRERF1-203ENST00000372917 ARHGAP5Q13017 1502 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 PPFIA4O75335 1185 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 ENO4A6NNW6 628 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 GPTP24298 496 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 CRYMQ14894 314 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 ANO6Q4KMQ2 910 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 CNNM3Q8NE01 707 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 CABS1Q96KC9 395 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 BAG1Q99933 345 aaPredicted RBP12.36□□□□□ -0.43
TRERF1-203ENST00000372917 MCM8Q9UJA3 840 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 CAPN7Q9Y6W3 813 aa12.36□□□□□ -0.43
TRERF1-203ENST00000372917 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
TRERF1-203ENST00000372917 ABCD1P33897 745 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 IQCA1Q86XH1 822 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 INPP5BP32019 993 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 MICAL1Q8TDZ2 1067 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 CBX8Q9HC52 389 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
TRERF1-203ENST00000372917 CCDC158Q5M9N0 1113 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 FUCA2Q9BTY2 467 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 L2HGDHQ9H9P8 463 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 AKAP2Q9Y2D5 859 aa12.35□□□□□ -0.43
TRERF1-203ENST00000372917 SGSM2O43147 1006 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 RPS6KA3P51812 740 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 TYRO3Q06418 890 aa12.34□□□□□ -0.43
TRERF1-203ENST00000372917 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.34□□□□□ -0.43
TRERF1-203ENST00000372917 SOS1Q07889 1333 aaPredicted RBP12.34□□□□□ -0.43
TRERF1-203ENST00000372917 TMEM132AQ24JP5 1023 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms