RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
COL9A2-202ENST00000372748 CDC37L1Q7L3B6 337 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 MRVI1Q9Y6F6 885 aa17.62■□□□□ 0.41
COL9A2-202ENST00000372748 TYRO3Q06418 890 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 MAP3K11Q16584 847 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 LARP1BQ659C4 914 aaKnown RBP17.61■□□□□ 0.41
COL9A2-202ENST00000372748 LMOD2Q6P5Q4 547 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 NUP62CLQ9H1M0 184 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 ANKRD7Q92527 254 aa17.61■□□□□ 0.41
COL9A2-202ENST00000372748 CACNA1FO60840 1977 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 TPM3P06753 285 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 TFIP11Q9UBB9 837 aaKnown RBP17.6■□□□□ 0.41
COL9A2-202ENST00000372748 TPCN1Q9ULQ1 816 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 CEMIPQ8WUJ3 1361 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 NAA30Q147X3 362 aaPredicted RBP17.6■□□□□ 0.41
COL9A2-202ENST00000372748 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
COL9A2-202ENST00000372748 ANO6Q4KMQ2 910 aa17.59■□□□□ 0.41
COL9A2-202ENST00000372748 PRAMEF22A3QJZ6 481 aa17.59■□□□□ 0.41
COL9A2-202ENST00000372748 CTIFO43310 598 aaKnown RBP17.59■□□□□ 0.41
COL9A2-202ENST00000372748 KRT85P78386 507 aa17.59■□□□□ 0.41
COL9A2-202ENST00000372748 GTPBP4Q9BZE4 634 aaKnown RBP17.59■□□□□ 0.41
COL9A2-202ENST00000372748 KCNJ4P48050 445 aa17.58■□□□□ 0.41
COL9A2-202ENST00000372748 TRIM5Q9C035 493 aa17.58■□□□□ 0.41
COL9A2-202ENST00000372748 TNMDQ9H2S6 317 aa17.58■□□□□ 0.41
COL9A2-202ENST00000372748 CBX8Q9HC52 389 aa17.58■□□□□ 0.41
COL9A2-202ENST00000372748 ZSWIM6Q9HCJ5 1215 aa17.58■□□□□ 0.41
COL9A2-202ENST00000372748 LTN1O94822 1766 aa17.58■□□□□ 0.4
COL9A2-202ENST00000372748 PXDNLA1KZ92 1463 aa17.58■□□□□ 0.4
COL9A2-202ENST00000372748 NCBP1Q09161 790 aaKnown RBP17.58■□□□□ 0.4
COL9A2-202ENST00000372748 PROSER3Q2NL68 480 aa17.58■□□□□ 0.4
COL9A2-202ENST00000372748 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.4
COL9A2-202ENST00000372748 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.4
COL9A2-202ENST00000372748 GOLGA6L4A6NEF3 574 aa17.57■□□□□ 0.4
COL9A2-202ENST00000372748 ZSCAN31Q96LW9 406 aaPredicted RBP17.57■□□□□ 0.4
COL9A2-202ENST00000372748 GLRX3O76003 335 aaKnown RBP17.57■□□□□ 0.4
COL9A2-202ENST00000372748 MAP3K2Q9Y2U5 619 aa17.57■□□□□ 0.4
COL9A2-202ENST00000372748 CWF19L2Q2TBE0 894 aaKnown RBP17.56■□□□□ 0.4
COL9A2-202ENST00000372748 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
COL9A2-202ENST00000372748 ADCY9O60503 1353 aa17.56■□□□□ 0.4
COL9A2-202ENST00000372748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.56■□□□□ 0.4
COL9A2-202ENST00000372748 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
COL9A2-202ENST00000372748 C9orf78Q9NZ63 289 aaPredicted RBP17.56■□□□□ 0.4
COL9A2-202ENST00000372748 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
COL9A2-202ENST00000372748 STK3Q13188 491 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 AKAP4Q5JQC9 854 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 RBM8AQ9Y5S9 174 aaKnown RBP17.55■□□□□ 0.4
COL9A2-202ENST00000372748 RGPD2P0DJD1 1756 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 TNNT1P13805 278 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
COL9A2-202ENST00000372748 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
COL9A2-202ENST00000372748 NECTIN1Q15223 517 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 ZSCAN25Q6NSZ9 544 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
COL9A2-202ENST00000372748 ZNF592Q92610 1267 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
COL9A2-202ENST00000372748 C1orf141Q5JVX7 400 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 CREB3L3Q68CJ9 461 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 SPATA32Q96LK8 384 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 DNAJC25Q9H1X3 360 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 RNMTO43148 476 aaKnown RBP17.54■□□□□ 0.4
COL9A2-202ENST00000372748 HSPA2P54652 639 aa17.54■□□□□ 0.4
COL9A2-202ENST00000372748 CCDC171Q6TFL3 1326 aa17.53■□□□□ 0.4
COL9A2-202ENST00000372748 ZNF75DP51815 510 aa17.53■□□□□ 0.4
COL9A2-202ENST00000372748 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
COL9A2-202ENST00000372748 ECHDC1Q9NTX5 307 aa17.53■□□□□ 0.4
COL9A2-202ENST00000372748 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
COL9A2-202ENST00000372748 NR1I2O75469 434 aa17.53■□□□□ 0.4
COL9A2-202ENST00000372748 TM6SF1Q9BZW5 370 aa17.53■□□□□ 0.4
COL9A2-202ENST00000372748 TTC41PQ6P2S7 1318 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 KIF20AO95235 890 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 GCP02774 474 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 HOXB7P09629 217 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 IFIT2P09913 472 aaKnown RBP17.52■□□□□ 0.4
COL9A2-202ENST00000372748 ZNF165P49910 485 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 ANKLE2Q86XL3 938 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 KCNH5Q8NCM2 988 aa17.52■□□□□ 0.4
COL9A2-202ENST00000372748 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.4
COL9A2-202ENST00000372748 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.39
COL9A2-202ENST00000372748 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.39
COL9A2-202ENST00000372748 AEBP2Q6ZN18 517 aaPredicted RBP17.52■□□□□ 0.39
COL9A2-202ENST00000372748 CCDC144CPQ8IYA2 1237 aa17.52■□□□□ 0.39
COL9A2-202ENST00000372748 BICD2Q8TD16 824 aa17.52■□□□□ 0.39
COL9A2-202ENST00000372748 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.39
COL9A2-202ENST00000372748 GIGYF1O75420 1035 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-202ENST00000372748 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
COL9A2-202ENST00000372748 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-202ENST00000372748 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
COL9A2-202ENST00000372748 AACSQ86V21 672 aa17.51■□□□□ 0.39
COL9A2-202ENST00000372748 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-202ENST00000372748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-202ENST00000372748 NFAT5O94916 1531 aa17.51■□□□□ 0.39
COL9A2-202ENST00000372748 N4BP2Q86UW6 1770 aaPredicted RBP17.51■□□□□ 0.39
COL9A2-202ENST00000372748 PXDNQ92626 1479 aa17.51■□□□□ 0.39
COL9A2-202ENST00000372748 ELP1O95163 1332 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms