RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 RMND1Q9NWS8 449 aa10.83□□□□□ -0.67
SPTAN1-203ENST00000372739 GJB2P29033 226 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 TRAF1Q13077 416 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 CRNKL1Q9BZJ0 848 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 UQCRFS1P1P0C7P4 283 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 ZGPATQ8N5A5 531 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 DDX12PQ92771 950 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 MACROD2A1Z1Q3 448 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 LDHAL6AQ6ZMR3 332 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 FAM107BQ9H098 131 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 ZSCAN16Q9H4T2 348 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 UBA7P41226 1012 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 STX6O43752 255 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC152Q4G0S7 254 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
SPTAN1-203ENST00000372739 PPM1EQ8WY54 764 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 ERICH4A6NGS2 130 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 GPTP24298 496 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 ERMNQ8TAM6 284 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 NEK1Q96PY6 1258 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 ABCC5O15440 1437 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 BCCIPQ9P287 314 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 IL16Q14005 1332 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 KRT23Q9C075 422 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 SAMM50Q9Y512 469 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 BMP15O95972 392 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 RFC4P35249 363 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 DMRT2Q9Y5R5 561 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 MCM5P33992 734 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 USP37Q86T82 979 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
SPTAN1-203ENST00000372739 KRT28Q7Z3Y7 464 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 EMILIN1Q9Y6C2 1016 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 FOXO3O43524 673 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 SNRPA1P09661 255 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TRIM27P14373 513 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC174Q6PII3 467 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TBC1D5Q92609 795 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 ANKRD36BQ8N2N9 1353 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TMCO5BA8MYB1 307 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 BMP2KLQ5H9B9 411 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 CKAP2LQ8IYA6 745 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 ZBTB3Q9H5J0 574 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TBCAO75347 108 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 LIG1P18858 919 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 UBE2HP62256 183 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 SPECC1Q5M775 1068 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 BBXQ8WY36 941 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 FSD2A1L4K1 749 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 PRC1O43663 620 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TNNT1P13805 278 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TMC6Q7Z403 805 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 TMTC2Q8N394 836 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 PLVAPQ9BX97 442 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 NBPF7P0C2Y1 421 aaPredicted RBP10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 HLTFQ14527 1009 aaKnown RBP eCLIP10.81□□□□□ -0.681e-7■■□□□ 12.6
SPTAN1-203ENST00000372739 TSNARE1Q96NA8 513 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 COMMD10Q9Y6G5 202 aa10.81□□□□□ -0.68
SPTAN1-203ENST00000372739 ZFYP08048 801 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 MAP3K9P80192 1104 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 LRRC45Q96CN5 670 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CNNM2Q9H8M5 875 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 SLC26A6Q9BXS9 759 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 PABPN1LA6NDY0 278 aaKnown RBP10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC175P0C221 793 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 DNA2P51530 1060 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 GRIPAP1Q4V328 841 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CPLX3Q8WVH0 158 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 UBE4AQ14139 1066 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC184Q52MB2 194 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 MICU3Q86XE3 530 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 TTC12Q9H892 705 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 ORC3Q9UBD5 711 aaPredicted RBP10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 IDEP14735 1019 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 CTAGE1Q96RT6 745 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 VAT1LQ9HCJ6 419 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 TBC1D9Q6ZT07 1266 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 UBE3BQ7Z3V4 1068 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 BICD1Q96G01 975 aa10.8□□□□□ -0.68
SPTAN1-203ENST00000372739 ACTN2P35609 894 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 DHX37Q8IY37 1157 aaKnown RBP10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 NOS1P29475 1434 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 TSPY3P0CV98 308 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 TSPY8P0CW00 308 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 WTAPQ15007 396 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 GIMAP7Q8NHV1 300 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 TTC22Q5TAA0 569 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 CEP63Q96MT8 703 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 HOMER2Q9NSB8 354 aa10.79□□□□□ -0.68
SPTAN1-203ENST00000372739 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.682e-6■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms