RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 TIAM2Q8IVF5 1701 aa29.33■■■□□ 2.29
COL9A2-201ENST00000372736 NLRP10Q86W26 655 aa29.32■■■□□ 2.28
COL9A2-201ENST00000372736 SALL2Q9Y467 1007 aaPredicted RBP29.32■■■□□ 2.28
COL9A2-201ENST00000372736 ANKRD13DQ6ZTN6 518 aa29.31■■■□□ 2.28
COL9A2-201ENST00000372736 UTP14AQ9BVJ6 771 aaKnown RBP29.31■■■□□ 2.28
COL9A2-201ENST00000372736 RNF123Q5XPI4 1314 aa29.3■■■□□ 2.28
COL9A2-201ENST00000372736 FANCIQ9NVI1 1328 aa29.3■■■□□ 2.28
COL9A2-201ENST00000372736 LMNB1P20700 586 aa29.3■■■□□ 2.28
COL9A2-201ENST00000372736 C7orf43Q8WVR3 580 aa29.3■■■□□ 2.28
COL9A2-201ENST00000372736 LAMB2P55268 1798 aa29.3■■■□□ 2.28
COL9A2-201ENST00000372736 WDR63Q8IWG1 891 aa29.29■■■□□ 2.28
COL9A2-201ENST00000372736 DICER1Q9UPY3 1922 aaKnown RBP29.28■■■□□ 2.28
COL9A2-201ENST00000372736 CCDC30Q5VVM6 783 aa29.28■■■□□ 2.28
COL9A2-201ENST00000372736 C3orf67Q6ZVT6 689 aa29.28■■■□□ 2.28
COL9A2-201ENST00000372736 PHAXQ9H814 394 aaKnown RBP29.28■■■□□ 2.28
COL9A2-201ENST00000372736 LTBP3Q9NS15 1303 aa29.27■■■□□ 2.28
COL9A2-201ENST00000372736 SOGA3Q5TF21 947 aa29.27■■■□□ 2.28
COL9A2-201ENST00000372736 SLC10A5Q5PT55 438 aa29.26■■■□□ 2.27
COL9A2-201ENST00000372736 ISCA1Q9BUE6 129 aa29.26■■■□□ 2.27
COL9A2-201ENST00000372736 CHMP4AQ9BY43 222 aa29.26■■■□□ 2.27
COL9A2-201ENST00000372736 DDX60Q8IY21 1712 aaKnown RBP29.25■■■□□ 2.27
COL9A2-201ENST00000372736 ZC3H4Q9UPT8 1303 aaKnown RBP29.25■■■□□ 2.27
COL9A2-201ENST00000372736 ALDH1B1P30837 517 aa29.25■■■□□ 2.27
COL9A2-201ENST00000372736 HOXA10P31260 410 aaPredicted RBP29.25■■■□□ 2.27
COL9A2-201ENST00000372736 TWISTNBQ3B726 338 aaPredicted RBP29.25■■■□□ 2.27
COL9A2-201ENST00000372736 C1QTNF8P60827 252 aa29.24■■■□□ 2.27
COL9A2-201ENST00000372736 GOLGA2Q08379 1002 aa29.24■■■□□ 2.27
COL9A2-201ENST00000372736 RPGRQ92834 1020 aaKnown RBP29.24■■■□□ 2.27
COL9A2-201ENST00000372736 TAOK3Q9H2K8 898 aa29.24■■■□□ 2.27
COL9A2-201ENST00000372736 SNED1Q8TER0 1413 aa29.23■■■□□ 2.27
COL9A2-201ENST00000372736 CCDC93Q567U6 631 aa29.23■■■□□ 2.27
COL9A2-201ENST00000372736 OLFM4Q6UX06 510 aa29.23■■■□□ 2.27
COL9A2-201ENST00000372736 SYNE4Q8N205 404 aa29.23■■■□□ 2.27
COL9A2-201ENST00000372736 SPINK5Q9NQ38 1064 aaPredicted RBP29.23■■■□□ 2.27
COL9A2-201ENST00000372736 TRMT112Q9UI30 125 aaKnown RBP29.23■■■□□ 2.27
COL9A2-201ENST00000372736 SH3TC1Q8TE82 1336 aa29.22■■■□□ 2.27
COL9A2-201ENST00000372736 ATP5J2-PTCD1G3V325 749 aa29.22■■■□□ 2.27
COL9A2-201ENST00000372736 KIF3CO14782 793 aa29.21■■■□□ 2.27
COL9A2-201ENST00000372736 RIC3Q7Z5B4 369 aa29.21■■■□□ 2.27
COL9A2-201ENST00000372736 ZNF428Q96B54 188 aa29.21■■■□□ 2.27
COL9A2-201ENST00000372736 NLRP3Q96P20 1036 aa29.21■■■□□ 2.27
COL9A2-201ENST00000372736 HCLS1P14317 486 aaPredicted RBP29.2■■■□□ 2.26
COL9A2-201ENST00000372736 ZNF521Q96K83 1311 aa29.2■■■□□ 2.26
COL9A2-201ENST00000372736 TCERG1O14776 1098 aaKnown RBP29.19■■■□□ 2.26
COL9A2-201ENST00000372736 TRIM28Q13263 835 aaKnown RBP29.19■■■□□ 2.26
COL9A2-201ENST00000372736 RBM17Q96I25 401 aaKnown RBP29.19■■■□□ 2.26
COL9A2-201ENST00000372736 CRAMP1Q96RY5 1269 aa29.19■■■□□ 2.26
COL9A2-201ENST00000372736 NMRK2Q9NPI5 230 aa29.19■■■□□ 2.26
COL9A2-201ENST00000372736 STK31Q9BXU1 1019 aa29.18■■■□□ 2.26
COL9A2-201ENST00000372736 CACNA1FO60840 1977 aa29.17■■■□□ 2.26
COL9A2-201ENST00000372736 DDX58O95786 925 aaKnown RBP29.16■■■□□ 2.26
COL9A2-201ENST00000372736 FKBP4Q02790 459 aaKnown RBP eCLIP29.16■■■□□ 2.26
COL9A2-201ENST00000372736 EXOSC9Q06265 439 aaKnown RBP29.16■■■□□ 2.26
COL9A2-201ENST00000372736 KDM2BQ8NHM5 1336 aa29.16■■■□□ 2.26
COL9A2-201ENST00000372736 CCER2I3L3R5 266 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 SLC51AQ86UW1 340 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 RTKN2Q8IZC4 609 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 FAM89AQ96GI7 184 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 MYD88Q99836 296 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 ABCC4O15439 1325 aa29.15■■■□□ 2.26
COL9A2-201ENST00000372736 METTL22Q9BUU2 404 aaPredicted RBP29.14■■■□□ 2.26
COL9A2-201ENST00000372736 MYH16Q9H6N6 1097 aa29.14■■■□□ 2.26
COL9A2-201ENST00000372736 PPEF1O14829 653 aaPredicted RBP29.13■■■□□ 2.25
COL9A2-201ENST00000372736 VAMP4O75379 141 aa29.13■■■□□ 2.25
COL9A2-201ENST00000372736 G2E3Q7L622 706 aa29.13■■■□□ 2.25
COL9A2-201ENST00000372736 MAP3K2Q9Y2U5 619 aa29.13■■■□□ 2.25
COL9A2-201ENST00000372736 TAF1P21675 1872 aa29.12■■■□□ 2.25
COL9A2-201ENST00000372736 SLC4A2P04920 1241 aa29.12■■■□□ 2.25
COL9A2-201ENST00000372736 CC2D2BQ6DHV5 1058 aa29.12■■■□□ 2.25
COL9A2-201ENST00000372736 PI4KAP2A4QPH2 592 aa29.11■■■□□ 2.25
COL9A2-201ENST00000372736 GLTPD2A6NH11 291 aa29.11■■■□□ 2.25
COL9A2-201ENST00000372736 KSR2Q6VAB6 950 aa29.11■■■□□ 2.25
COL9A2-201ENST00000372736 PI4KAP1Q8N8J0 262 aa29.11■■■□□ 2.25
COL9A2-201ENST00000372736 ZNF277Q9NRM2 450 aaPredicted RBP29.11■■■□□ 2.25
COL9A2-201ENST00000372736 RTL5Q5HYW3 569 aaPredicted RBP29.1■■■□□ 2.25
COL9A2-201ENST00000372736 CCDC191Q8NCU4 936 aa29.1■■■□□ 2.25
COL9A2-201ENST00000372736 PSMD1Q99460 953 aa29.1■■■□□ 2.25
COL9A2-201ENST00000372736 WDR90Q96KV7 1748 aa29.09■■■□□ 2.25
COL9A2-201ENST00000372736 ZBTB38Q8NAP3 1195 aaPredicted RBP29.09■■■□□ 2.25
COL9A2-201ENST00000372736 FLIIQ13045 1269 aa29.08■■■□□ 2.25
COL9A2-201ENST00000372736 CWC25Q9NXE8 425 aaPredicted RBP29.08■■■□□ 2.25
COL9A2-201ENST00000372736 COL4A1P02462 1669 aa29.08■■■□□ 2.25
COL9A2-201ENST00000372736 LRRC37AA6NMS7 1700 aa29.08■■■□□ 2.25
COL9A2-201ENST00000372736 IRS4O14654 1257 aaPredicted RBP29.07■■■□□ 2.24
COL9A2-201ENST00000372736 ATP6V0A2Q9Y487 856 aa29.07■■■□□ 2.24
COL9A2-201ENST00000372736 COL4A5P29400 1685 aa29.06■■■□□ 2.24
COL9A2-201ENST00000372736 IGKV5-2P06315 115 aa29.06■■■□□ 2.24
COL9A2-201ENST00000372736 SF3B3Q15393 1217 aaKnown RBP29.06■■■□□ 2.24
COL9A2-201ENST00000372736 GRIPAP1Q4V328 841 aa29.06■■■□□ 2.24
COL9A2-201ENST00000372736 DDX46Q7L014 1031 aaKnown RBP29.06■■■□□ 2.24
COL9A2-201ENST00000372736 RRAGCQ9HB90 399 aa29.06■■■□□ 2.24
COL9A2-201ENST00000372736 PCCAP05165 728 aaPredicted RBP29.05■■■□□ 2.24
COL9A2-201ENST00000372736 IARSP41252 1262 aaKnown RBP29.05■■■□□ 2.24
COL9A2-201ENST00000372736 GRAPQ13588 217 aa29.05■■■□□ 2.24
COL9A2-201ENST00000372736 GRAPLQ8TC17 118 aaPredicted RBP29.05■■■□□ 2.24
COL9A2-201ENST00000372736 TOMM70O94826 608 aa29.04■■■□□ 2.24
COL9A2-201ENST00000372736 BBOX1O75936 387 aa29.03■■■□□ 2.24
COL9A2-201ENST00000372736 NEXNQ0ZGT2 675 aa29.02■■■□□ 2.24
COL9A2-201ENST00000372736 FKBP5Q13451 457 aaPredicted RBP29.02■■■□□ 2.24
COL9A2-201ENST00000372736 DPY19L2Q6NUT2 758 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms