RNA–Protein interactions for RNA: ENST00000372499.5

LRMDA-201, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRMDA, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-201ENST00000372499 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
LRMDA-201ENST00000372499 VEGFAP15692 232 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-201ENST00000372499 GTF2E1P29083 439 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-201ENST00000372499 ALDH1B1P30837 517 aa11.97□□□□□ -0.49
LRMDA-201ENST00000372499 HOXA10P31260 410 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-201ENST00000372499 C16orf71Q8IYS4 520 aaPredicted RBP11.97□□□□□ -0.49
LRMDA-201ENST00000372499 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
LRMDA-201ENST00000372499 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
LRMDA-201ENST00000372499 FKBP4Q02790 459 aaKnown RBP eCLIP11.96□□□□□ -0.49
LRMDA-201ENST00000372499 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 C3orf67Q6ZVT6 689 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 COPS6Q7L5N1 327 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
LRMDA-201ENST00000372499 APAF1O14727 1248 aa11.95□□□□□ -0.5
LRMDA-201ENST00000372499 SLC10A5Q5PT55 438 aa11.95□□□□□ -0.5
LRMDA-201ENST00000372499 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
LRMDA-201ENST00000372499 PPP1R42Q7Z4L9 355 aa11.95□□□□□ -0.5
LRMDA-201ENST00000372499 SMC1BQ8NDV3 1235 aa11.95□□□□□ -0.5
LRMDA-201ENST00000372499 CCDC184Q52MB2 194 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 SLC51AQ86UW1 340 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 CRAMP1Q96RY5 1269 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 PSMD1Q99460 953 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 UTP14AQ9BVJ6 771 aaKnown RBP11.94□□□□□ -0.5
LRMDA-201ENST00000372499 ZNF277Q9NRM2 450 aaPredicted RBP11.94□□□□□ -0.5
LRMDA-201ENST00000372499 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
LRMDA-201ENST00000372499 ANKRD36CQ5JPF3 1778 aa11.94□□□□□ -0.5
LRMDA-201ENST00000372499 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 DDNO94850 711 aaPredicted RBP11.93□□□□□ -0.5
LRMDA-201ENST00000372499 AIMP1Q12904 312 aaKnown RBP11.93□□□□□ -0.5
LRMDA-201ENST00000372499 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 DUSP27Q5VZP5 1158 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
LRMDA-201ENST00000372499 L3MBTL3Q96JM7 780 aaPredicted RBP11.93□□□□□ -0.5
LRMDA-201ENST00000372499 PCNTO95613 3336 aa11.93□□□□□ -0.5
LRMDA-201ENST00000372499 COL4A5P29400 1685 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 FZD9O00144 591 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 HTRA3P83110 453 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 CC2D2BQ6DHV5 1058 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 SYNE4Q8N205 404 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 RBM17Q96I25 401 aaKnown RBP11.92□□□□□ -0.5
LRMDA-201ENST00000372499 IFT57Q9NWB7 429 aa11.92□□□□□ -0.5
LRMDA-201ENST00000372499 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
LRMDA-201ENST00000372499 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
LRMDA-201ENST00000372499 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
LRMDA-201ENST00000372499 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
LRMDA-201ENST00000372499 LAMB2P55268 1798 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 PPEF1O14829 653 aaPredicted RBP11.9□□□□□ -0.5
LRMDA-201ENST00000372499 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 JMYQ8N9B5 988 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 SCN4AP35499 1836 aa11.9□□□□□ -0.5
LRMDA-201ENST00000372499 ABCC4O15439 1325 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
LRMDA-201ENST00000372499 GNAI1P63096 354 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 CALD1Q05682 793 aaKnown RBP11.89□□□□□ -0.51
LRMDA-201ENST00000372499 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 TAF1DQ9H5J8 278 aaPredicted RBP11.89□□□□□ -0.51
LRMDA-201ENST00000372499 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 TRMT112Q9UI30 125 aaKnown RBP11.89□□□□□ -0.51
LRMDA-201ENST00000372499 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
LRMDA-201ENST00000372499 SH3TC1Q8TE82 1336 aa11.88□□□□□ -0.51
LRMDA-201ENST00000372499 IQCA1LA6NCM1 817 aa11.88□□□□□ -0.51
LRMDA-201ENST00000372499 TRIM28Q13263 835 aaKnown RBP11.88□□□□□ -0.51
LRMDA-201ENST00000372499 RTFDC1Q9BY42 306 aaPredicted RBP11.88□□□□□ -0.51
LRMDA-201ENST00000372499 DDX60Q8IY21 1712 aaKnown RBP11.88□□□□□ -0.51
LRMDA-201ENST00000372499 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
LRMDA-201ENST00000372499 BBOX1O75936 387 aa11.87□□□□□ -0.51
LRMDA-201ENST00000372499 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
LRMDA-201ENST00000372499 CHADLQ6NUI6 762 aa11.87□□□□□ -0.51
LRMDA-201ENST00000372499 GPC2Q8N158 579 aa11.87□□□□□ -0.51
LRMDA-201ENST00000372499 ATP5J2-PTCD1G3V325 749 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
LRMDA-201ENST00000372499 TCERG1O14776 1098 aaKnown RBP11.86□□□□□ -0.51
LRMDA-201ENST00000372499 LDHDQ86WU2 507 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 SP8Q8IXZ3 490 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 TSPYL6Q8N831 410 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 ZNF428Q96B54 188 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 VPS33BQ9H267 617 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 PHAXQ9H814 394 aaKnown RBP11.86□□□□□ -0.51
LRMDA-201ENST00000372499 TAF1P21675 1872 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 LTBP1Q14766 1721 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 PASKQ96RG2 1323 aa11.86□□□□□ -0.51
LRMDA-201ENST00000372499 COL4A1P02462 1669 aa11.85□□□□□ -0.51
LRMDA-201ENST00000372499 ZNF316A6NFI3 1004 aaPredicted RBP11.85□□□□□ -0.51
LRMDA-201ENST00000372499 GRAPQ13588 217 aa11.85□□□□□ -0.51
LRMDA-201ENST00000372499 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms