RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 HS1BP3Q53T59 392 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 DBF4Q9UBU7 674 aaPredicted RBP14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 TBC1D2BQ9UPU7 963 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 KIF2CQ99661 725 aa14.03□□□□□ -0.16
TSPAN1-201ENST00000372003 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
TSPAN1-201ENST00000372003 DDX21Q9NR30 783 aaKnown RBP eCLIP14.03□□□□□ -0.16
TSPAN1-201ENST00000372003 ZNF831Q5JPB2 1677 aa14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 SLC4A2P04920 1241 aa14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 KLHL40Q2TBA0 621 aa14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 ANP32BQ92688 251 aaKnown RBP14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 CHMP4AQ9BY43 222 aa14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 SRP68Q9UHB9 627 aaKnown RBP14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 ERBB4Q15303 1308 aa14.02□□□□□ -0.16
TSPAN1-201ENST00000372003 ZPR1O75312 459 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 ADRA2BP18089 450 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 COPS6Q7L5N1 327 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 DZIP3Q86Y13 1208 aaKnown RBP14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 COL15A1P39059 1388 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 A0A087WZG4 1122 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 ZBTB7AO95365 584 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 USPL1Q5W0Q7 1092 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 TTLL7Q6ZT98 887 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 TAF1LQ8IZX4 1826 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 XAGE3Q8WTP9 111 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 HYPKQ9NX55 129 aa14.01□□□□□ -0.17
TSPAN1-201ENST00000372003 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
TSPAN1-201ENST00000372003 ZBTB7BO15156 539 aaPredicted RBP14□□□□□ -0.17
TSPAN1-201ENST00000372003 ZNF445P59923 1031 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 NUCB2P80303 420 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 MSL1Q68DK7 614 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 GAS2L3Q86XJ1 694 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 LNPKQ9C0E8 428 aa14□□□□□ -0.17
TSPAN1-201ENST00000372003 CDC45O75419 566 aa13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 RABEP1Q15276 862 aa13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 ZSCAN30Q86W11 494 aa13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 NARFQ9UHQ1 456 aa13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 ATF5Q9Y2D1 282 aaPredicted RBP13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 CICQ96RK0 1608 aaPredicted RBP13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
TSPAN1-201ENST00000372003 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
TSPAN1-201ENST00000372003 G2E3Q7L622 706 aa13.98□□□□□ -0.17
TSPAN1-201ENST00000372003 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
TSPAN1-201ENST00000372003 ABCC4O15439 1325 aa13.98□□□□□ -0.17
TSPAN1-201ENST00000372003 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
TSPAN1-201ENST00000372003 NASPP49321 788 aaPredicted RBP13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 TBC1D9Q6ZT07 1266 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 CAMTA2O94983 1202 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 GYS1P13807 737 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 HLFQ16534 295 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 BICDL1Q6ZP65 573 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 MRPL50Q8N5N7 158 aaKnown RBP13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 SLC16A10Q8TF71 515 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 PDCL3Q9H2J4 239 aa13.97□□□□□ -0.17
TSPAN1-201ENST00000372003 OFD1O75665 1012 aa13.96□□□□□ -0.17
TSPAN1-201ENST00000372003 ANKRD45Q5TZF3 282 aa13.96□□□□□ -0.17
TSPAN1-201ENST00000372003 ANKRD13DQ6ZTN6 518 aa13.96□□□□□ -0.17
TSPAN1-201ENST00000372003 BCL2L12Q9HB09 334 aa13.96□□□□□ -0.17
TSPAN1-201ENST00000372003 LAMB4A4D0S4 1761 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 BAG4O95429 457 aaKnown RBP13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 FLIIQ13045 1269 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 FKBP5Q13451 457 aaPredicted RBP13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 RIC3Q7Z5B4 369 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 NLGN1Q8N2Q7 840 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 API5Q9BZZ5 524 aaKnown RBP13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 MTFR1LQ9H019 292 aa13.95□□□□□ -0.18
TSPAN1-201ENST00000372003 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
TSPAN1-201ENST00000372003 UBR3Q6ZT12 1888 aa13.94□□□□□ -0.18
TSPAN1-201ENST00000372003 ERVV-1B6SEH8 477 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 CYP2E1P05181 493 aaPredicted RBP13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 PLBD2Q8NHP8 589 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 DDX49Q9Y6V7 483 aaKnown RBP13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 PI4KAP2A4QPH2 592 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 MCM5P33992 734 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 PI4KAP1Q8N8J0 262 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 MAP3K2Q9Y2U5 619 aa13.93□□□□□ -0.18
TSPAN1-201ENST00000372003 FAM177BA6PVY3 158 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 MMP10P09238 476 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 GPTP24298 496 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 NFIXQ14938 502 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 CLEC4GQ6UXB4 293 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 SPON1Q9HCB6 807 aa13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
TSPAN1-201ENST00000372003 TUBGCP6Q96RT7 1819 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 F6X3S4 739 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 ZNF500O60304 480 aaPredicted RBP13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 CD2BP2O95400 341 aaKnown RBP13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 POLD1P28340 1107 aa13.91□□□□□ -0.18
TSPAN1-201ENST00000372003 KSR2Q6VAB6 950 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms