RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 CCDC171Q6TFL3 1326 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 NBPF7P0C2Y1 421 aaPredicted RBP11.4□□□□□ -0.58
LRRC40-201ENST00000370952 RBM43Q6ZSC3 357 aaKnown RBP11.4□□□□□ -0.58
LRRC40-201ENST00000370952 SCAND2PQ9GZW5 306 aaPredicted RBP11.4□□□□□ -0.58
LRRC40-201ENST00000370952 RBM8AQ9Y5S9 174 aaKnown RBP11.4□□□□□ -0.58
LRRC40-201ENST00000370952 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 DLC1Q96QB1 1528 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 CREB3L3Q68CJ9 461 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 LRRN4CLQ8ND94 238 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 ERO1AQ96HE7 468 aa11.4□□□□□ -0.58
LRRC40-201ENST00000370952 MON2Q7Z3U7 1717 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 FAM208AQ9UK61 1670 aaKnown RBP11.39□□□□□ -0.59
LRRC40-201ENST00000370952 ZKSCAN1P17029 563 aaPredicted RBP11.39□□□□□ -0.59
LRRC40-201ENST00000370952 IQCB1Q15051 598 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 ERCC6LQ2NKX8 1250 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 PPP6R1Q9UPN7 881 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 ARHGEF10O15013 1369 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 SLU7O95391 586 aaKnown RBP11.39□□□□□ -0.59
LRRC40-201ENST00000370952 CCZ1BP86790 482 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 CCZ1P86791 482 aaPredicted RBP11.39□□□□□ -0.59
LRRC40-201ENST00000370952 POLA2Q14181 598 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 NECTIN1Q15223 517 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 RUFY2Q8WXA3 655 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 ERCC4Q92889 916 aaPredicted RBP11.39□□□□□ -0.59
LRRC40-201ENST00000370952 FAM227BQ96M60 508 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 TM6SF1Q9BZW5 370 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 C3P01024 1663 aa11.39□□□□□ -0.59
LRRC40-201ENST00000370952 JAK2O60674 1132 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 FOSBP53539 338 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 PEAK1Q9H792 1746 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 PRR36Q9H6K5 1346 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 GLRX3O76003 335 aaKnown RBP11.38□□□□□ -0.59
LRRC40-201ENST00000370952 PDCP20941 246 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 CCAR2Q8N163 923 aaKnown RBP11.38□□□□□ -0.59
LRRC40-201ENST00000370952 BECN2A8MW95 431 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 CAPN2P17655 700 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 CDC25BP30305 580 aa11.38□□□□□ -0.59
LRRC40-201ENST00000370952 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 EIF2S2P20042 333 aaKnown RBP11.37□□□□□ -0.59
LRRC40-201ENST00000370952 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
LRRC40-201ENST00000370952 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 SETD1AO15047 1707 aaKnown RBP11.37□□□□□ -0.59
LRRC40-201ENST00000370952 ITSN1Q15811 1721 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 SLC27A2O14975 620 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 BLOC1S2Q6QNY1 142 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 FTOQ9C0B1 505 aaKnown RBP eCLIP11.37□□□□□ -0.59
LRRC40-201ENST00000370952 CALCOCO1Q9P1Z2 691 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
LRRC40-201ENST00000370952 NMIQ13287 307 aaPredicted RBP11.36□□□□□ -0.59
LRRC40-201ENST00000370952 HDGFL1Q5TGJ6 251 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 MRFAP1L1Q96HT8 127 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 PA2G4Q9UQ80 394 aaKnown RBP11.36□□□□□ -0.59
LRRC40-201ENST00000370952 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 ANXA1P04083 346 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 HNRNPH2P55795 449 aaKnown RBP11.36□□□□□ -0.59
LRRC40-201ENST00000370952 TOB2Q14106 344 aaPredicted RBP11.36□□□□□ -0.59
LRRC40-201ENST00000370952 GORABQ5T7V8 394 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 KCNB2Q92953 911 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 BRF1Q92994 677 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 CACNA1FO60840 1977 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 AKAP12Q02952 1782 aa11.36□□□□□ -0.59
LRRC40-201ENST00000370952 CLCN6P51797 869 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 TAF7Q15545 349 aaPredicted RBP11.35□□□□□ -0.59
LRRC40-201ENST00000370952 SARM1Q6SZW1 724 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 SYT10Q6XYQ8 523 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 CLASRPQ8N2M8 674 aaKnown RBP11.35□□□□□ -0.59
LRRC40-201ENST00000370952 ECHDC1Q9NTX5 307 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 NEMFO60524 1076 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 SNW1Q13573 536 aaKnown RBP11.35□□□□□ -0.59
LRRC40-201ENST00000370952 TTC41PQ6P2S7 1318 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 CHD2O14647 1828 aaKnown RBP11.35□□□□□ -0.59
LRRC40-201ENST00000370952 ADCY9O60503 1353 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 METP08581 1390 aa11.35□□□□□ -0.59
LRRC40-201ENST00000370952 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 BMS1Q14692 1282 aaKnown RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 STX1AQ16623 288 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 SLFNL1Q499Z3 407 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 AOPEPQ8N6M6 819 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 MAP4K1Q92918 833 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 EYA1Q99502 592 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 FHOD1Q9Y613 1164 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 H3BQV1 296 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 POLR3GO15318 223 aaPredicted RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 IFIT2P09913 472 aaKnown RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 RPS6KB1P23443 525 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 CYP2C19P33261 490 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 RESTQ13127 1097 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 IFFO2Q5TF58 517 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 CCAR1Q8IX12 1150 aaKnown RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 DHX40Q8IX18 779 aaKnown RBP11.34□□□□□ -0.59
LRRC40-201ENST00000370952 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
LRRC40-201ENST00000370952 PI4KAP2A4QPH2 592 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms