RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 KDM2BQ8NHM5 1336 aa14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 COL4A5P29400 1685 aa14.33□□□□□ -0.12
EXOSC1-202ENST00000370885 RIC1Q4ADV7 1423 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 LAMB2P55268 1798 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 HOXA10P31260 410 aaPredicted RBP14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 TCIRG1Q13488 830 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 NLRP10Q86W26 655 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
EXOSC1-202ENST00000370885 CCDC93Q567U6 631 aa14.31□□□□□ -0.12
EXOSC1-202ENST00000370885 TSPYL6Q8N831 410 aa14.31□□□□□ -0.12
EXOSC1-202ENST00000370885 RBM46Q8TBY0 533 aaKnown RBP14.31□□□□□ -0.12
EXOSC1-202ENST00000370885 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
EXOSC1-202ENST00000370885 TAF1P21675 1872 aa14.31□□□□□ -0.12
EXOSC1-202ENST00000370885 COL4A1P02462 1669 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 WDR90Q96KV7 1748 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 DDNO94850 711 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 HOXB7P09629 217 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 ALDH1B1P30837 517 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 HTRA3P83110 453 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 MIER1Q8N108 512 aa14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 UTP14AQ9BVJ6 771 aaKnown RBP14.3□□□□□ -0.12
EXOSC1-202ENST00000370885 GNAI1P63096 354 aa14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 PLBD2Q8NHP8 589 aa14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 TSR2Q969E8 191 aaKnown RBP14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 ISCA1Q9BUE6 129 aa14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
EXOSC1-202ENST00000370885 ATP5J2-PTCD1G3V325 749 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 TCERG1O14776 1098 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 ANKRD13DQ6ZTN6 518 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 DDX60Q8IY21 1712 aaKnown RBP14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 CRAMP1Q96RY5 1269 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 ZNF541Q9H0D2 1346 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
EXOSC1-202ENST00000370885 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
EXOSC1-202ENST00000370885 POTEJP0CG39 1038 aa14.27□□□□□ -0.13
EXOSC1-202ENST00000370885 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
EXOSC1-202ENST00000370885 DNAJC5GQ8N7S2 189 aa14.27□□□□□ -0.13
EXOSC1-202ENST00000370885 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.13
EXOSC1-202ENST00000370885 ABCC4O15439 1325 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 CCDC27Q2M243 656 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 HSP90AB3PQ58FF7 597 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 RTKN2Q8IZC4 609 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 FAM89AQ96GI7 184 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 RBM17Q96I25 401 aaKnown RBP14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 NLRP3Q96P20 1036 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 HYPKQ9NX55 129 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 PCNTO95613 3336 aa14.26□□□□□ -0.13
EXOSC1-202ENST00000370885 PPEF1O14829 653 aaPredicted RBP14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 ANP32CO43423 234 aa14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 IARSP41252 1262 aaKnown RBP14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 DPY19L2Q6NUT2 758 aa14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 PSMD1Q99460 953 aa14.25□□□□□ -0.13
EXOSC1-202ENST00000370885 SH3TC1Q8TE82 1336 aa14.24□□□□□ -0.13
EXOSC1-202ENST00000370885 FZD9O00144 591 aa14.24□□□□□ -0.13
EXOSC1-202ENST00000370885 FSTL1Q12841 308 aa14.24□□□□□ -0.13
EXOSC1-202ENST00000370885 RTL5Q5HYW3 569 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-202ENST00000370885 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
EXOSC1-202ENST00000370885 RNF123Q5XPI4 1314 aa14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 APLP1P51693 650 aa14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 CALD1Q05682 793 aaKnown RBP14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 TRIM28Q13263 835 aaKnown RBP14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 G2E3Q7L622 706 aa14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 JARID2Q92833 1246 aaPredicted RBP14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 ATP6V0A2Q9Y487 856 aa14.23□□□□□ -0.13
EXOSC1-202ENST00000370885 SMC1BQ8NDV3 1235 aa14.22□□□□□ -0.13
EXOSC1-202ENST00000370885 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
EXOSC1-202ENST00000370885 LTBP1Q14766 1721 aa14.21□□□□□ -0.13
EXOSC1-202ENST00000370885 CC2D2BQ6DHV5 1058 aa14.21□□□□□ -0.13
EXOSC1-202ENST00000370885 RIC3Q7Z5B4 369 aa14.21□□□□□ -0.13
EXOSC1-202ENST00000370885 CELF1Q92879 486 aaKnown RBP14.21□□□□□ -0.13
EXOSC1-202ENST00000370885 MYD88Q99836 296 aa14.21□□□□□ -0.13
EXOSC1-202ENST00000370885 DUOX1Q9NRD9 1551 aa14.21□□□□□ -0.14
EXOSC1-202ENST00000370885 GRAPQ13588 217 aa14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 SP8Q8IXZ3 490 aa14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 TAF1DQ9H5J8 278 aaPredicted RBP14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 SCN4AP35499 1836 aa14.2□□□□□ -0.14
EXOSC1-202ENST00000370885 IL16Q14005 1332 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 FANCIQ9NVI1 1328 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 IRS4O14654 1257 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 BBOX1O75936 387 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 IGKV5-2P06315 115 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 GOLGA2Q08379 1002 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 AOC3Q16853 763 aa14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
EXOSC1-202ENST00000370885 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms