RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
CHUK-201ENST00000370397 TOB2Q14106 344 aaPredicted RBP20.88■□□□□ 0.93
CHUK-201ENST00000370397 CREB3L3Q68CJ9 461 aa20.88■□□□□ 0.93
CHUK-201ENST00000370397 KIF20AO95235 890 aa20.87■□□□□ 0.93
CHUK-201ENST00000370397 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
CHUK-201ENST00000370397 ZNF75DP51815 510 aa20.87■□□□□ 0.93
CHUK-201ENST00000370397 PGBD1Q96JS3 809 aa20.87■□□□□ 0.93
CHUK-201ENST00000370397 NUP62CLQ9H1M0 184 aa20.87■□□□□ 0.93
CHUK-201ENST00000370397 CCDC186Q7Z3E2 898 aa20.87■□□□□ 0.93
CHUK-201ENST00000370397 CAMK4Q16566 473 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 CCDC144BQ3MJ40 725 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 ANO6Q4KMQ2 910 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 CCDC144CPQ8IYA2 1237 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 SLIT1O75093 1534 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 RBM8AQ9Y5S9 174 aaKnown RBP20.86■□□□□ 0.93
CHUK-201ENST00000370397 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.86■□□□□ 0.93
CHUK-201ENST00000370397 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
CHUK-201ENST00000370397 CLSTN2Q9H4D0 955 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 ESF1Q9H501 851 aaKnown RBP20.86■□□□□ 0.93
CHUK-201ENST00000370397 DACT1Q9NYF0 836 aa20.86■□□□□ 0.93
CHUK-201ENST00000370397 VPS37CA5D8V6 355 aaPredicted RBP20.85■□□□□ 0.93
CHUK-201ENST00000370397 FAM227BQ96M60 508 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 CHPF2Q9P2E5 772 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 COL15A1P39059 1388 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 SLC27A2O14975 620 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 KRT85P78386 507 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 PLCB2Q00722 1185 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 ECHDC1Q9NTX5 307 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 LTKP29376 864 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 DNAAF4Q8WXU2 420 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 FEZ1Q99689 392 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 ERBB3P21860 1342 aa20.85■□□□□ 0.93
CHUK-201ENST00000370397 PI4KAP2A4QPH2 592 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 SMTNL1A8MU46 457 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 PI4KAP1Q8N8J0 262 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 CACTINQ8WUQ7 758 aaKnown RBP20.84■□□□□ 0.93
CHUK-201ENST00000370397 LEO1Q8WVC0 666 aaPredicted RBP20.84■□□□□ 0.93
CHUK-201ENST00000370397 KAZALD1Q96I82 304 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 FAM53CQ9NYF3 392 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 ADAMTS7Q9UKP4 1686 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 NFAT5O94916 1531 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 GOLGA6L6A8MZA4 724 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 NAA30Q147X3 362 aaPredicted RBP20.84■□□□□ 0.93
CHUK-201ENST00000370397 NR1I2O75469 434 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 HOXB7P09629 217 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 LARP1BQ659C4 914 aaKnown RBP20.84■□□□□ 0.93
CHUK-201ENST00000370397 CKAP2LQ8IYA6 745 aa20.84■□□□□ 0.93
CHUK-201ENST00000370397 TNRQ92752 1358 aa20.83■□□□□ 0.93
CHUK-201ENST00000370397 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
CHUK-201ENST00000370397 NPHP3Q7Z494 1330 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 HEG1Q9ULI3 1381 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 GIGYF1O75420 1035 aaPredicted RBP20.83■□□□□ 0.92
CHUK-201ENST00000370397 CDC25BP30305 580 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 IQCB1Q15051 598 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 TSGA10IPQ3SY00 556 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 EVI5LQ96CN4 794 aa20.83■□□□□ 0.92
CHUK-201ENST00000370397 PDIA4P13667 645 aaKnown RBP20.82■□□□□ 0.92
CHUK-201ENST00000370397 HSP90AB4PQ58FF6 505 aa20.82■□□□□ 0.92
CHUK-201ENST00000370397 LARP1Q6PKG0 1096 aaKnown RBP20.82■□□□□ 0.92
CHUK-201ENST00000370397 RUFY2Q8WXA3 655 aa20.82■□□□□ 0.92
CHUK-201ENST00000370397 KCNQ3O43525 872 aa20.82■□□□□ 0.92
CHUK-201ENST00000370397 SASH1O94885 1247 aa20.82■□□□□ 0.92
CHUK-201ENST00000370397 AMPHP49418 695 aa20.82■□□□□ 0.92
CHUK-201ENST00000370397 A0A0D9SFI3 127 aa20.81■□□□□ 0.92
CHUK-201ENST00000370397 NMIQ13287 307 aaPredicted RBP20.81■□□□□ 0.92
CHUK-201ENST00000370397 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
CHUK-201ENST00000370397 C16orf45Q96MC5 204 aaPredicted RBP20.81■□□□□ 0.92
CHUK-201ENST00000370397 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
CHUK-201ENST00000370397 NYAP1Q6ZVC0 841 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 OGFRQ9NZT2 677 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
CHUK-201ENST00000370397 RPS6KB1P23443 525 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 SARM1Q6SZW1 724 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 TNMDQ9H2S6 317 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 DDX19AQ9NUU7 478 aaKnown RBP20.8■□□□□ 0.92
CHUK-201ENST00000370397 UTYO14607 1347 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 ADD1P35611 737 aaKnown RBP20.8■□□□□ 0.92
CHUK-201ENST00000370397 RESTQ13127 1097 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 ABCC6O95255 1503 aa20.8■□□□□ 0.92
CHUK-201ENST00000370397 CHAF1AQ13111 956 aaPredicted RBP20.79■□□□□ 0.92
CHUK-201ENST00000370397 SCAND2PQ9GZW5 306 aaPredicted RBP20.79■□□□□ 0.92
CHUK-201ENST00000370397 LGR6Q9HBX8 967 aa20.79■□□□□ 0.92
CHUK-201ENST00000370397 USP27XA6NNY8 438 aa20.79■□□□□ 0.92
CHUK-201ENST00000370397 USPL1Q5W0Q7 1092 aa20.79■□□□□ 0.92
CHUK-201ENST00000370397 CAMTA1Q9Y6Y1 1673 aa20.78■□□□□ 0.92
CHUK-201ENST00000370397 EAF2Q96CJ1 260 aaPredicted RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 TLR7Q9NYK1 1049 aaKnown RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 CHMP3Q9Y3E7 222 aa20.78■□□□□ 0.92
CHUK-201ENST00000370397 MORC2Q9Y6X9 1032 aaPredicted RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 C5P01031 1676 aa20.78■□□□□ 0.92
CHUK-201ENST00000370397 TCEANC2Q96MN5 208 aa20.78■□□□□ 0.92
CHUK-201ENST00000370397 DDX60Q8IY21 1712 aaKnown RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 ZNF589Q86UQ0 364 aaPredicted RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 CLASRPQ8N2M8 674 aaKnown RBP20.78■□□□□ 0.92
CHUK-201ENST00000370397 KCND1Q9NSA2 647 aa20.78■□□□□ 0.92
CHUK-201ENST00000370397 ANXA1P04083 346 aa20.77■□□□□ 0.92
CHUK-201ENST00000370397 DNAJC25Q9H1X3 360 aa20.77■□□□□ 0.92
CHUK-201ENST00000370397 TFIP11Q9UBB9 837 aaKnown RBP20.77■□□□□ 0.92
CHUK-201ENST00000370397 ARHGAP23Q9P227 1491 aa20.77■□□□□ 0.92
CHUK-201ENST00000370397 ZNF142P52746 1687 aaPredicted RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms