RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 NDUFB9Q9Y6M9 179 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 HSP90B1P14625 803 aaKnown RBP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 HOXC9P31274 260 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 HSP90AB4PQ58FF6 505 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
PHTF1-203ENST00000369600 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 V9GYY5 206 aaPredicted RBP16.99■□□□□ 0.31
PHTF1-203ENST00000369600 NRKQ7Z2Y5 1582 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 NR1I2O75469 434 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 TNNT1P13805 278 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 TEFQ10587 303 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 LRRC2Q9BYS8 371 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 MAP3K2Q9Y2U5 619 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 LTKP29376 864 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 TLR7Q9NYK1 1049 aaKnown RBP16.98■□□□□ 0.31
PHTF1-203ENST00000369600 JAK2O60674 1132 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 ZNF165P49910 485 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 FGD1P98174 961 aa16.98■□□□□ 0.31
PHTF1-203ENST00000369600 A0A0D9SFI3 127 aa16.97■□□□□ 0.31
PHTF1-203ENST00000369600 NPHP1O15259 732 aa16.97■□□□□ 0.31
PHTF1-203ENST00000369600 CLIP2Q9UDT6 1046 aa16.97■□□□□ 0.31
PHTF1-203ENST00000369600 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 SLC27A2O14975 620 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 NECTIN1Q15223 517 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 IL17RAQ96F46 866 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 KDRP35968 1356 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 H3BQV1 296 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 TPM3P06753 285 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 ARID5BQ14865 1188 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 IFFO2Q5TF58 517 aa16.96■□□□□ 0.31
PHTF1-203ENST00000369600 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.31
PHTF1-203ENST00000369600 RBM33Q96EV2 1170 aaKnown RBP16.96■□□□□ 0.31
PHTF1-203ENST00000369600 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
PHTF1-203ENST00000369600 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 FILIP1Q7Z7B0 1213 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 CHGBP05060 677 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 G3BP1Q13283 466 aaKnown RBP eCLIP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 EVI5LQ96CN4 794 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 NRXN3Q9Y4C0 1643 aa16.95■□□□□ 0.3
PHTF1-203ENST00000369600 EPB41L2O43491 1005 aaKnown RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 TRMT1Q9NXH9 659 aaKnown RBP16.95■□□□□ 0.3
PHTF1-203ENST00000369600 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
PHTF1-203ENST00000369600 PDCP20941 246 aa16.94■□□□□ 0.3
PHTF1-203ENST00000369600 ZSCAN25Q6NSZ9 544 aa16.94■□□□□ 0.3
PHTF1-203ENST00000369600 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
PHTF1-203ENST00000369600 PSMA5P28066 241 aa16.94■□□□□ 0.3
PHTF1-203ENST00000369600 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
PHTF1-203ENST00000369600 ZNF771Q7L3S4 317 aaPredicted RBP16.94■□□□□ 0.3
PHTF1-203ENST00000369600 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
PHTF1-203ENST00000369600 CACTINQ8WUQ7 758 aaKnown RBP16.94■□□□□ 0.3
PHTF1-203ENST00000369600 ZNF75DP51815 510 aa16.93■□□□□ 0.3
PHTF1-203ENST00000369600 CCDC144BQ3MJ40 725 aa16.93■□□□□ 0.3
PHTF1-203ENST00000369600 CCDC144CPQ8IYA2 1237 aa16.93■□□□□ 0.3
PHTF1-203ENST00000369600 CCDC112Q8NEF3 446 aa16.93■□□□□ 0.3
PHTF1-203ENST00000369600 FTOQ9C0B1 505 aaKnown RBP eCLIP16.93■□□□□ 0.3
PHTF1-203ENST00000369600 XRN1Q8IZH2 1706 aaKnown RBP16.93■□□□□ 0.3
PHTF1-203ENST00000369600 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
PHTF1-203ENST00000369600 SCAND2PQ9GZW5 306 aaPredicted RBP16.93■□□□□ 0.3
PHTF1-203ENST00000369600 BRF1Q92994 677 aa16.93■□□□□ 0.3
PHTF1-203ENST00000369600 RNF20Q5VTR2 975 aa16.92■□□□□ 0.3
PHTF1-203ENST00000369600 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
PHTF1-203ENST00000369600 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
PHTF1-203ENST00000369600 CCDC129Q6ZRS4 1044 aa16.92■□□□□ 0.3
PHTF1-203ENST00000369600 PGBD1Q96JS3 809 aa16.92■□□□□ 0.3
PHTF1-203ENST00000369600 TM6SF1Q9BZW5 370 aa16.92■□□□□ 0.3
PHTF1-203ENST00000369600 GUCY1B3Q02153 619 aa16.91■□□□□ 0.3
PHTF1-203ENST00000369600 MAP4K1Q92918 833 aa16.91■□□□□ 0.3
PHTF1-203ENST00000369600 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
PHTF1-203ENST00000369600 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
PHTF1-203ENST00000369600 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
PHTF1-203ENST00000369600 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
PHTF1-203ENST00000369600 USP27XA6NNY8 438 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 BECN2A8MW95 431 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 SASH1O94885 1247 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 SUCLG2Q96I99 432 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
PHTF1-203ENST00000369600 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 FAM208AQ9UK61 1670 aaKnown RBP16.9■□□□□ 0.3
PHTF1-203ENST00000369600 ADCY9O60503 1353 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 RPS6KB1P23443 525 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
PHTF1-203ENST00000369600 NBPF6Q5VWK0 638 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 NBPF4Q96M43 638 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 CLSTN2Q9H4D0 955 aa16.9■□□□□ 0.3
PHTF1-203ENST00000369600 DDX19AQ9NUU7 478 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms