RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 ATP8B2P98198 1209 aa22.07■■□□□ 1.12
PRDM1-202ENST00000369091 PTH1RQ03431 593 aa22.07■■□□□ 1.12
PRDM1-202ENST00000369091 TEX35Q5T0J7 233 aa22.07■■□□□ 1.12
PRDM1-202ENST00000369091 TPCN1Q9ULQ1 816 aa22.07■■□□□ 1.12
PRDM1-202ENST00000369091 PREX1Q8TCU6 1659 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 SARM1Q6SZW1 724 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 TXLNBQ8N3L3 684 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 PI4K2BQ8TCG2 481 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 STAG3Q9UJ98 1225 aa22.06■■□□□ 1.12
PRDM1-202ENST00000369091 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.06■■□□□ 1.12
PRDM1-202ENST00000369091 CCDC93Q567U6 631 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 VPS53Q5VIR6 699 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 E4F1Q66K89 784 aaPredicted RBP22.05■■□□□ 1.12
PRDM1-202ENST00000369091 CCDC191Q8NCU4 936 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 SH2B1Q9NRF2 756 aaPredicted RBP22.05■■□□□ 1.12
PRDM1-202ENST00000369091 MUM1L1Q5H9M0 696 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 NME9Q86XW9 330 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 PPP1R13BQ96KQ4 1090 aa22.05■■□□□ 1.12
PRDM1-202ENST00000369091 MYO1CO00159 1063 aa22.04■■□□□ 1.12
PRDM1-202ENST00000369091 NOP2P46087 812 aaKnown RBP22.04■■□□□ 1.12
PRDM1-202ENST00000369091 HAP1P54257 671 aaPredicted RBP22.04■■□□□ 1.12
PRDM1-202ENST00000369091 MLECQ14165 292 aa22.04■■□□□ 1.12
PRDM1-202ENST00000369091 GGT6Q6P531 493 aa22.04■■□□□ 1.12
PRDM1-202ENST00000369091 TMCO3Q6UWJ1 677 aa22.04■■□□□ 1.12
PRDM1-202ENST00000369091 FBXW7Q969H0 707 aa22.04■■□□□ 1.12
PRDM1-202ENST00000369091 ZSCAN31Q96LW9 406 aaPredicted RBP22.04■■□□□ 1.12
PRDM1-202ENST00000369091 SCAND2PQ9GZW5 306 aaPredicted RBP22.04■■□□□ 1.12
PRDM1-202ENST00000369091 TPM4P67936 248 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 LARP1Q6PKG0 1096 aaKnown RBP22.03■■□□□ 1.12
PRDM1-202ENST00000369091 TCEANC2Q96MN5 208 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 EPC1Q9H2F5 836 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 EFCC1Q9HA90 598 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 CYP46A1Q9Y6A2 500 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 PTPRMP28827 1452 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 AOX1Q06278 1338 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 OAS2P29728 719 aaKnown RBP22.03■■□□□ 1.12
PRDM1-202ENST00000369091 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
PRDM1-202ENST00000369091 SASH3O75995 380 aa22.02■■□□□ 1.12
PRDM1-202ENST00000369091 ZSCAN26Q16670 478 aa22.02■■□□□ 1.12
PRDM1-202ENST00000369091 ORC3Q9UBD5 711 aaPredicted RBP22.02■■□□□ 1.12
PRDM1-202ENST00000369091 LMTK2Q8IWU2 1503 aa22.02■■□□□ 1.12
PRDM1-202ENST00000369091 DHX16O60231 1041 aaKnown RBP22.02■■□□□ 1.12
PRDM1-202ENST00000369091 CCDC34Q96HJ3 373 aa22.01■■□□□ 1.11
PRDM1-202ENST00000369091 ZSWIM6Q9HCJ5 1215 aa22.01■■□□□ 1.11
PRDM1-202ENST00000369091 NEXMIFQ5QGS0 1516 aa22.01■■□□□ 1.11
PRDM1-202ENST00000369091 BECN2A8MW95 431 aa22.01■■□□□ 1.11
PRDM1-202ENST00000369091 IFIT2P09913 472 aaKnown RBP22.01■■□□□ 1.11
PRDM1-202ENST00000369091 DHX40Q8IX18 779 aaKnown RBP22.01■■□□□ 1.11
PRDM1-202ENST00000369091 KIF2AO00139 706 aaPredicted RBP22■■□□□ 1.11
PRDM1-202ENST00000369091 NECTIN2Q92692 538 aa22■■□□□ 1.11
PRDM1-202ENST00000369091 GNAI3P08754 354 aa22■■□□□ 1.11
PRDM1-202ENST00000369091 ERCC4Q92889 916 aaPredicted RBP22■■□□□ 1.11
PRDM1-202ENST00000369091 CEBPZQ03701 1054 aaKnown RBP21.99■■□□□ 1.11
PRDM1-202ENST00000369091 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
PRDM1-202ENST00000369091 SULT6B1Q6IMI4 303 aa21.99■■□□□ 1.11
PRDM1-202ENST00000369091 NBPF11Q86T75 865 aa21.99■■□□□ 1.11
PRDM1-202ENST00000369091 UBXN4Q92575 508 aa21.99■■□□□ 1.11
PRDM1-202ENST00000369091 ARGLU1Q9NWB6 273 aaPredicted RBP21.99■■□□□ 1.11
PRDM1-202ENST00000369091 STK3Q13188 491 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 KCND1Q9NSA2 647 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 STX1AQ16623 288 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 AOPEPQ8N6M6 819 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
PRDM1-202ENST00000369091 SOS1Q07889 1333 aaPredicted RBP21.98■■□□□ 1.11
PRDM1-202ENST00000369091 RAB11FIP3O75154 756 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 SURF6O75683 361 aaKnown RBP21.97■■□□□ 1.11
PRDM1-202ENST00000369091 CASQ1P31415 396 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 DDX11Q96FC9 970 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
PRDM1-202ENST00000369091 TRHP20396 242 aaPredicted RBP21.97■■□□□ 1.11
PRDM1-202ENST00000369091 UBXN6Q9BZV1 441 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 DNAI1Q9UI46 699 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 ATP7BP35670 1465 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 ADCY9O60503 1353 aa21.97■■□□□ 1.11
PRDM1-202ENST00000369091 TBC1D8O95759 1140 aa21.96■■□□□ 1.11
PRDM1-202ENST00000369091 CLTCQ00610 1675 aaKnown RBP21.96■■□□□ 1.11
PRDM1-202ENST00000369091 ARMCX5Q6P1M9 558 aa21.96■■□□□ 1.11
PRDM1-202ENST00000369091 HOMER1Q86YM7 354 aa21.96■■□□□ 1.11
PRDM1-202ENST00000369091 TEX2Q8IWB9 1127 aa21.96■■□□□ 1.11
PRDM1-202ENST00000369091 GTF2A1P52655 376 aaPredicted RBP21.95■■□□□ 1.11
PRDM1-202ENST00000369091 CAVIN2O95810 425 aa21.95■■□□□ 1.1
PRDM1-202ENST00000369091 PDCP20941 246 aa21.95■■□□□ 1.1
PRDM1-202ENST00000369091 REXO1L1PQ8IX06 675 aa21.95■■□□□ 1.1
PRDM1-202ENST00000369091 RHPN1Q8TCX5 695 aa21.95■■□□□ 1.1
PRDM1-202ENST00000369091 FANCGO15287 622 aa21.94■■□□□ 1.1
PRDM1-202ENST00000369091 SMC1AQ14683 1233 aaKnown RBP21.94■■□□□ 1.1
PRDM1-202ENST00000369091 MNS1Q8NEH6 495 aa21.94■■□□□ 1.1
PRDM1-202ENST00000369091 SRLQ86TD4 932 aa21.94■■□□□ 1.1
PRDM1-202ENST00000369091 CARD6Q9BX69 1037 aa21.94■■□□□ 1.1
PRDM1-202ENST00000369091 GOLPH3LQ9H4A5 285 aa21.94■■□□□ 1.1
PRDM1-202ENST00000369091 RRP15Q9Y3B9 282 aaKnown RBP21.94■■□□□ 1.1
PRDM1-202ENST00000369091 TADA3O75528 432 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 LMAN1P49257 510 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 GSDMDP57764 484 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 FLIIQ13045 1269 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 GPS2Q13227 327 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 TMC6Q7Z403 805 aa21.93■■□□□ 1.1
PRDM1-202ENST00000369091 FTOQ9C0B1 505 aaKnown RBP eCLIP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms