RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ZSWIM6Q9HCJ5 1215 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 KCND1Q9NSA2 647 aa12.46□□□□□ -0.41
LYSMD1-201ENST00000368908 TTC21BQ7Z4L5 1316 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 IGSF3O75054 1194 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 CASTP20810 708 aaKnown RBP12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 PDCP20941 246 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 TPD52L1Q16890 204 aaPredicted RBP12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 TRIM5Q9C035 493 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 SCAND2PQ9GZW5 306 aaPredicted RBP12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 PDRG1Q9NUG6 133 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 SLAIN2Q9P270 581 aa12.46□□□□□ -0.42
LYSMD1-201ENST00000368908 NHSL1Q5SYE7 1610 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 LIG1P18858 919 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 FLIIQ13045 1269 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 POLA2Q14181 598 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 RUFY2Q8WXA3 655 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 ERO1AQ96HE7 468 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 TSPYL4Q9UJ04 414 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 LRRFIP2Q9Y608 721 aaKnown RBP12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 OVOS2A0A0J9YW53 1432 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 OVOS2Q6IE36 1432 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 VPS37CA5D8V6 355 aaPredicted RBP12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 ST3GAL1Q11201 340 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 NYAP1Q6ZVC0 841 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 CYP46A1Q9Y6A2 500 aa12.45□□□□□ -0.42
LYSMD1-201ENST00000368908 KIF2AO00139 706 aaPredicted RBP12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 CACTINQ8WUQ7 758 aaKnown RBP12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 CLIP2Q9UDT6 1046 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 NRBP1Q9UHY1 535 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 TTC41PQ6P2S7 1318 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 KIF1BPQ96EK5 621 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 MRFAP1L1Q96HT8 127 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 CALCOCO1Q9P1Z2 691 aa12.44□□□□□ -0.42
LYSMD1-201ENST00000368908 MYH15Q9Y2K3 1946 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 PDE4CQ08493 712 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 KMT5BQ4FZB7 885 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 RHPN1Q8TCX5 695 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 TIGD1Q96MW7 591 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 UBTFL1P0CB47 393 aaPredicted RBP12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 JAKMIP1Q96N16 626 aaKnown RBP12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 IL1RAPL2Q9NP60 686 aa12.43□□□□□ -0.42
LYSMD1-201ENST00000368908 GIGYF1O75420 1035 aaPredicted RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 ZNF165P49910 485 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 LARP1BQ659C4 914 aaKnown RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 LRRC8AQ8IWT6 810 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 NUDT16Q96DE0 195 aaKnown RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 ALDH8A1Q9H2A2 487 aaPredicted RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 CCDC61Q9Y6R9 512 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 PTPN14Q15678 1187 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 ME3Q16798 604 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 HSP90AB4PQ58FF6 505 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 USP44Q9H0E7 712 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 KDRP35968 1356 aa12.42□□□□□ -0.42
LYSMD1-201ENST00000368908 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 GOLGA6L4A6NEF3 574 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 CAMK4Q16566 473 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 CCDC144BQ3MJ40 725 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 CDC37L1Q7L3B6 337 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 CCDC144CPQ8IYA2 1237 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 SPATA32Q96LK8 384 aa12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
LYSMD1-201ENST00000368908 BRINP3Q76B58 766 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 CKAP2LQ8IYA6 745 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 LEO1Q8WVC0 666 aaPredicted RBP12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 PHLPP1O60346 1717 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 SLU7O95391 586 aaKnown RBP12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 CPA1P15085 419 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 NECTIN1Q15223 517 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 ANKRD1Q15327 319 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 FBXO38Q6PIJ6 1188 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 CWC27Q6UX04 472 aaKnown RBP12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 BABAM1Q9NWV8 329 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 ERBB3P21860 1342 aa12.4□□□□□ -0.42
LYSMD1-201ENST00000368908 TULP2O00295 520 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 MAP4K4O95819 1239 aaPredicted RBP12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 IQCB1Q15051 598 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 TSPYL1Q9H0U9 437 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 ZKSCAN1P17029 563 aaPredicted RBP12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 PSMA5P28066 241 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 PPP1R42Q7Z4L9 355 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 PRR36Q9H6K5 1346 aa12.39□□□□□ -0.43
LYSMD1-201ENST00000368908 CTAGE5O15320 804 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms