RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TOMM70O94826 608 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 NUDT7P0C024 238 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 FSTL1Q12841 308 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 CRB1P82279 1406 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 SMG6Q86US8 1419 aaKnown RBP11.48□□□□□ -0.57
TPM3-213ENST00000368545 UNCXA6NJT0 531 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 TSC1Q92574 1164 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 KHSRPQ92945 711 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM3-213ENST00000368545 COG3Q96JB2 828 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 LMO7Q8WWI1 1683 aa11.48□□□□□ -0.57
TPM3-213ENST00000368545 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
TPM3-213ENST00000368545 KIAA0232Q92628 1395 aa11.47□□□□□ -0.57
TPM3-213ENST00000368545 TTC21BQ7Z4L5 1316 aa11.47□□□□□ -0.57
TPM3-213ENST00000368545 C10orf71Q711Q0 1435 aa11.47□□□□□ -0.57
TPM3-213ENST00000368545 GNEQ9Y223 722 aaKnown RBP11.47□□□□□ -0.57
TPM3-213ENST00000368545 LRRC37A3O60309 1634 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 HAX1O00165 279 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 DDB1Q16531 1140 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 TBC1D9Q6ZT07 1266 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 NME9Q86XW9 330 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 NGEFQ8N5V2 710 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.57
TPM3-213ENST00000368545 TATDN2Q93075 761 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 WWC3Q9ULE0 1092 aa11.46□□□□□ -0.57
TPM3-213ENST00000368545 PIK3C2AO00443 1686 aa11.46□□□□□ -0.58
TPM3-213ENST00000368545 STRN4Q9NRL3 753 aa11.45□□□□□ -0.58
TPM3-213ENST00000368545 GCGRP47871 477 aa11.45□□□□□ -0.58
TPM3-213ENST00000368545 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
TPM3-213ENST00000368545 PMFBP1Q8TBY8 1022 aa11.45□□□□□ -0.58
TPM3-213ENST00000368545 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
TPM3-213ENST00000368545 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 USP46P62068 366 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 COL13A1Q5TAT6 717 aaPredicted RBP11.44□□□□□ -0.58
TPM3-213ENST00000368545 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 NHSQ6T4R5 1651 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 CFAP99D6REC4 459 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 MTMR2Q13614 643 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 SLC27A3Q5K4L6 730 aa11.44□□□□□ -0.58
TPM3-213ENST00000368545 CICQ96RK0 1608 aaPredicted RBP11.44□□□□□ -0.58
TPM3-213ENST00000368545 USP31Q70CQ4 1352 aa11.43□□□□□ -0.58
TPM3-213ENST00000368545 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
TPM3-213ENST00000368545 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
TPM3-213ENST00000368545 SOX11P35716 441 aa11.42□□□□□ -0.58
TPM3-213ENST00000368545 SEMA3FQ13275 785 aa11.42□□□□□ -0.58
TPM3-213ENST00000368545 SMAPO00193 183 aa11.42□□□□□ -0.58
TPM3-213ENST00000368545 POLKQ9UBT6 870 aa11.42□□□□□ -0.58
TPM3-213ENST00000368545 DIAPH1O60610 1272 aaKnown RBP11.41□□□□□ -0.58
TPM3-213ENST00000368545 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
TPM3-213ENST00000368545 RUNDC1Q96C34 613 aa11.41□□□□□ -0.58
TPM3-213ENST00000368545 ABCC6O95255 1503 aa11.4□□□□□ -0.58
TPM3-213ENST00000368545 NEFLP07196 543 aa11.4□□□□□ -0.58
TPM3-213ENST00000368545 PNNQ9H307 717 aaKnown RBP11.4□□□□□ -0.58
TPM3-213ENST00000368545 COL5A2P05997 1499 aaPredicted RBP11.4□□□□□ -0.58
TPM3-213ENST00000368545 USP19O94966 1318 aa11.4□□□□□ -0.58
TPM3-213ENST00000368545 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
TPM3-213ENST00000368545 PLEKHG2Q9H7P9 1386 aa11.39□□□□□ -0.59
TPM3-213ENST00000368545 ATP9BO43861 1147 aa11.39□□□□□ -0.59
TPM3-213ENST00000368545 U2AF1L5P0DN76 240 aaPredicted RBP11.39□□□□□ -0.59
TPM3-213ENST00000368545 U2AF1Q01081 240 aaKnown RBP eCLIP11.39□□□□□ -0.597e-10■■□□□ 13
TPM3-213ENST00000368545 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
TPM3-213ENST00000368545 USP35Q9P2H5 1018 aa11.39□□□□□ -0.59
TPM3-213ENST00000368545 ZNF521Q96K83 1311 aa11.39□□□□□ -0.59
TPM3-213ENST00000368545 C7P10643 843 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 NR6A1Q15406 480 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
TPM3-213ENST00000368545 ZMIZ1Q9ULJ6 1067 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 EP400Q96L91 3159 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 RBM47A0AV96 593 aaKnown RBP11.38□□□□□ -0.59
TPM3-213ENST00000368545 TRIM6-TRIM34B2RNG4 842 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 PPP1R3GB7ZBB8 358 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 APAF1O14727 1248 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 TMEM164Q5U3C3 297 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
TPM3-213ENST00000368545 FLAD1Q8NFF5 587 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 STK32AQ8WU08 396 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
TPM3-213ENST00000368545 EMILIN1Q9Y6C2 1016 aa11.38□□□□□ -0.59
TPM3-213ENST00000368545 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 U2SURPO15042 1029 aaKnown RBP11.37□□□□□ -0.59
TPM3-213ENST00000368545 PPM1GO15355 546 aaPredicted RBP11.37□□□□□ -0.59
TPM3-213ENST00000368545 SLC10A3P09131 477 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 PHLDB3Q6NSJ2 640 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 BCL2L12Q9HB09 334 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 PRDM10Q9NQV6 1147 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
TPM3-213ENST00000368545 PACS2Q86VP3 889 aa11.36□□□□□ -0.59
TPM3-213ENST00000368545 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM3-213ENST00000368545 RRS1Q15050 365 aaKnown RBP11.36□□□□□ -0.59
TPM3-213ENST00000368545 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
TPM3-213ENST00000368545 PDGFDQ9GZP0 370 aaPredicted RBP11.36□□□□□ -0.59
TPM3-213ENST00000368545 IGSF5Q9NSI5 407 aa11.36□□□□□ -0.59
TPM3-213ENST00000368545 LTN1O94822 1766 aa11.36□□□□□ -0.59
TPM3-213ENST00000368545 ABTB2Q8N961 1025 aa11.35□□□□□ -0.59
TPM3-213ENST00000368545 DCBLD2Q96PD2 775 aa11.35□□□□□ -0.59
TPM3-213ENST00000368545 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
TPM3-213ENST00000368545 MAPK8IP3Q9UPT6 1336 aa11.35□□□□□ -0.59
TPM3-213ENST00000368545 FLT4P35916 1363 aa11.35□□□□□ -0.59
TPM3-213ENST00000368545 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
TPM3-213ENST00000368545 FBLN1P23142 703 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms