RNA–Protein interactions for RNA: ENST00000368463.7

PBXIP1-202, Transcript of PBX homeobox interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBXIP1, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-202ENST00000368463 DNAAF4Q8WXU2 420 aa17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 SSH3Q8TE77 659 aa17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 NCBP1Q09161 790 aaKnown RBP17.06■□□□□ 0.32
PBXIP1-202ENST00000368463 PIK3C2BO00750 1634 aa17.05■□□□□ 0.32
PBXIP1-202ENST00000368463 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
PBXIP1-202ENST00000368463 RUFY2Q8WXA3 655 aa17.05■□□□□ 0.32
PBXIP1-202ENST00000368463 GLRX3O76003 335 aaKnown RBP17.05■□□□□ 0.32
PBXIP1-202ENST00000368463 ABCA9Q8IUA7 1624 aa17.05■□□□□ 0.32
PBXIP1-202ENST00000368463 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 ECHDC1Q9NTX5 307 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 CRB1P82279 1406 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 OTUD7BQ6GQQ9 843 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 BRF1Q92994 677 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 FUCA2Q9BTY2 467 aa17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 NCOA5Q9HCD5 579 aaKnown RBP17.04■□□□□ 0.32
PBXIP1-202ENST00000368463 G3BP1Q13283 466 aaKnown RBP eCLIP17.03■□□□□ 0.321e-7■■■□□ 15.7
PBXIP1-202ENST00000368463 EAF2Q96CJ1 260 aaPredicted RBP17.03■□□□□ 0.32
PBXIP1-202ENST00000368463 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
PBXIP1-202ENST00000368463 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-202ENST00000368463 SPTLC3Q9NUV7 552 aa17.02■□□□□ 0.32
PBXIP1-202ENST00000368463 LEO1Q8WVC0 666 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-202ENST00000368463 ZFP91Q96JP5 570 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-202ENST00000368463 ZNF215Q9UL58 517 aaPredicted RBP17.02■□□□□ 0.32
PBXIP1-202ENST00000368463 SLC27A2O14975 620 aa17.02■□□□□ 0.31
PBXIP1-202ENST00000368463 CCDC171Q6TFL3 1326 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 BTBD11A6QL63 1104 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 SKILP12757 684 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 ELF2Q15723 593 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 DDX46Q7L014 1031 aaKnown RBP17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 PGBD1Q96JS3 809 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 ME1P48163 572 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 ZNF75DP51815 510 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
PBXIP1-202ENST00000368463 VPS53Q5VIR6 699 aa17■□□□□ 0.31
PBXIP1-202ENST00000368463 GPATCH3Q96I76 525 aa17■□□□□ 0.31
PBXIP1-202ENST00000368463 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
PBXIP1-202ENST00000368463 ATP7BP35670 1465 aa17■□□□□ 0.31
PBXIP1-202ENST00000368463 RIMS1Q86UR5 1692 aaKnown RBP17■□□□□ 0.31
PBXIP1-202ENST00000368463 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
PBXIP1-202ENST00000368463 CPSF1Q10570 1443 aaKnown RBP16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 SMC2O95347 1197 aa16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 GTF3C6Q969F1 213 aa16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 NEUROD6Q96NK8 337 aa16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 BICC1Q9H694 974 aaKnown RBP16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 ZSWIM6Q9HCJ5 1215 aa16.99■□□□□ 0.31
PBXIP1-202ENST00000368463 AATKQ6ZMQ8 1374 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 A0A0G2JLW4 131 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 POLR3DP05423 398 aaPredicted RBP16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 GOLGA8FQ08AF8 430 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 GOLGA8DPQ0D2H9 430 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 ZNF530Q6P9A1 599 aaPredicted RBP16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 Q6ZUG5 572 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 GJB4Q9NTQ9 266 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 PTPN14Q15678 1187 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 TMEM87AQ8NBN3 555 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 AOPEPQ8N6M6 819 aa16.98■□□□□ 0.31
PBXIP1-202ENST00000368463 HSP90AB3PQ58FF7 597 aa16.97■□□□□ 0.31
PBXIP1-202ENST00000368463 CCAR1Q8IX12 1150 aaKnown RBP16.97■□□□□ 0.31
PBXIP1-202ENST00000368463 CCDC85AQ96PX6 553 aaPredicted RBP16.97■□□□□ 0.31
PBXIP1-202ENST00000368463 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
PBXIP1-202ENST00000368463 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
PBXIP1-202ENST00000368463 A0A1B0GVL5 298 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 PTCD1O75127 700 aaKnown RBP16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 LTKP29376 864 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 NECTIN1Q15223 517 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 BBXQ8WY36 941 aaPredicted RBP16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 SUCLG2Q96I99 432 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 SH2B1Q9NRF2 756 aaPredicted RBP16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 AMOTL2Q9Y2J4 779 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 MLH3Q9UHC1 1453 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 CCDC69A6NI79 296 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 POLR3GO15318 223 aaPredicted RBP16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 APOBRQ0VD83 1088 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 ZSCAN31Q96LW9 406 aaPredicted RBP16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 HOXC9P31274 260 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 LRRN4CLQ8ND94 238 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
PBXIP1-202ENST00000368463 HECW2Q9P2P5 1572 aa16.96■□□□□ 0.3
PBXIP1-202ENST00000368463 SASH1O94885 1247 aa16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 EPC1Q9H2F5 836 aa16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 GTF2F1P35269 517 aaKnown RBP eCLIP16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 HAND2P61296 217 aa16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 TOB2Q14106 344 aaPredicted RBP16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 CCAR2Q8N163 923 aaKnown RBP16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
PBXIP1-202ENST00000368463 SCAND2PQ9GZW5 306 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms