RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 KCNH2Q12809 1159 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 ANKLE1Q8NAG6 615 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 ARMC2Q8NEN0 867 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 ARHGEF28Q8N1W1 1705 aaKnown RBP9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 RAB3GAP2Q9H2M9 1393 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 SZT2Q5T011 3432 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 ZBTB24O43167 697 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 POLD1P28340 1107 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 EVA1CP58658 441 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 SLC16A10Q8TF71 515 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 PLSCR2Q9NRY7 297 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 FCF1Q9Y324 198 aaKnown RBP9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 NDUFB9Q9Y6M9 179 aa9.06□□□□□ -0.96
ECHDC1-202ENST00000368289 ADGRF5Q8IZF2 1346 aa9.05□□□□□ -0.96
ECHDC1-202ENST00000368289 NUP155O75694 1391 aa9.05□□□□□ -0.96
ECHDC1-202ENST00000368289 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
ECHDC1-202ENST00000368289 CUL9Q8IWT3 2517 aa9.05□□□□□ -0.96
ECHDC1-202ENST00000368289 TULP4Q9NRJ4 1543 aa9.05□□□□□ -0.96
ECHDC1-202ENST00000368289 COL5A2P05997 1499 aaPredicted RBP9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 RNF223E7ERA6 249 aa9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 FOXN1O15353 648 aa9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 NR6A1Q15406 480 aa9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 DDB1Q16531 1140 aa9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
ECHDC1-202ENST00000368289 IFT172Q9UG01 1749 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 KIAA1210Q9ULL0 1709 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 KCNQ4P56696 695 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 FSTL1Q12841 308 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 ABHD8Q96I13 439 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 ZMYND15Q9H091 742 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 HMX1Q9NP08 348 aaPredicted RBP9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 TOPAZ1Q8N9V7 1692 aa9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
ECHDC1-202ENST00000368289 PPEF1O14829 653 aaPredicted RBP9.02□□□□□ -0.97
ECHDC1-202ENST00000368289 GPKOWQ92917 476 aaPredicted RBP eCLIP9.02□□□□□ -0.97
ECHDC1-202ENST00000368289 TUBGCP6Q96RT7 1819 aa9.01□□□□□ -0.97
ECHDC1-202ENST00000368289 A6NJR5 290 aa9.01□□□□□ -0.97
ECHDC1-202ENST00000368289 SIRT1Q96EB6 747 aa9.01□□□□□ -0.97
ECHDC1-202ENST00000368289 TRIM34Q9BYJ4 488 aa9.01□□□□□ -0.97
ECHDC1-202ENST00000368289 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
ECHDC1-202ENST00000368289 CPDO75976 1380 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 CRB1P82279 1406 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 ANKARQ7Z5J8 1434 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 YTHDC2Q9H6S0 1430 aaKnown RBP9□□□□□ -0.97
ECHDC1-202ENST00000368289 MSL1Q68DK7 614 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 PRDM10Q9NQV6 1147 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 FKBPLQ9UIM3 349 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 COG6Q9Y2V7 657 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 CD2APQ9Y5K6 639 aa9□□□□□ -0.97
ECHDC1-202ENST00000368289 CICQ96RK0 1608 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 RPIAP49247 311 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 SAFB2Q14151 953 aaKnown RBP eCLIP8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 ACSBG1Q96GR2 724 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 QSER1Q2KHR3 1735 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 KNDC1Q76NI1 1749 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 RPGRIP1LQ68CZ1 1315 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
ECHDC1-202ENST00000368289 MKI67P46013 3256 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 CD2BP2O95400 341 aaKnown RBP8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 EPS8L1Q8TE68 723 aa8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 GDPD2Q9HCC8 539 aa8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 TBC1D2BQ9UPU7 963 aa8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 USP19O94966 1318 aa8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 IGSF1Q8N6C5 1336 aa8.98□□□□□ -0.97
ECHDC1-202ENST00000368289 PPLO60437 1756 aa8.97□□□□□ -0.97
ECHDC1-202ENST00000368289 ABL2P42684 1182 aa8.97□□□□□ -0.97
ECHDC1-202ENST00000368289 FAM50AQ14320 339 aaKnown RBP8.97□□□□□ -0.97
ECHDC1-202ENST00000368289 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
ECHDC1-202ENST00000368289 PTCRAQ6ISU1 281 aaPredicted RBP8.97□□□□□ -0.97
ECHDC1-202ENST00000368289 PDXDC2PQ6P474 469 aa8.96□□□□□ -0.98
ECHDC1-202ENST00000368289 CLUAP1Q96AJ1 413 aa8.96□□□□□ -0.98
ECHDC1-202ENST00000368289 GPSM3Q9Y4H4 160 aa8.96□□□□□ -0.98
ECHDC1-202ENST00000368289 NHSQ6T4R5 1651 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 PTK2Q05397 1052 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 SMIM5Q71RC9 77 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 POM121Q96HA1 1249 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 PRAM1Q96QH2 718 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 HIRIP3Q9BW71 556 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 TFCP2L1Q9NZI6 479 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 USP6P35125 1406 aa8.95□□□□□ -0.98
ECHDC1-202ENST00000368289 COL6A3P12111 3177 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 CCER2I3L3R5 266 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 AMIGO3Q86WK7 504 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 ZNF592Q92610 1267 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 RRAGCQ9HB90 399 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 KCPQ6ZWJ8 1503 aa8.94□□□□□ -0.98
ECHDC1-202ENST00000368289 GCP02774 474 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 ITGAEP38570 1179 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 SLC19A1P41440 591 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 LBX1P52954 281 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 WNT7BP56706 349 aa8.93□□□□□ -0.98
ECHDC1-202ENST00000368289 TRIM32Q13049 653 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms