RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 CCDC102AQ96A19 550 aa9.81□□□□□ -0.84
CD46-209ENST00000367047 DDX19AQ9NUU7 478 aaKnown RBP9.81□□□□□ -0.84
CD46-209ENST00000367047 LIMCH1Q9UPQ0 1083 aa9.81□□□□□ -0.84
CD46-209ENST00000367047 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 GPATCH8Q9UKJ3 1502 aaKnown RBP9.8□□□□□ -0.84
CD46-209ENST00000367047 LAMC1P11047 1609 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 RPS6KA5O75582 802 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 IFIT2P09913 472 aaKnown RBP9.8□□□□□ -0.84
CD46-209ENST00000367047 SFPQP23246 707 aaKnown RBP eCLIP9.8□□□□□ -0.84
CD46-209ENST00000367047 TRDNQ13061 729 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 WWC2Q6AWC2 1192 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 SARM1Q6SZW1 724 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 RUFY3Q7L099 469 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 ARHGAP45Q92619 1136 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 SPATA32Q96LK8 384 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 THUMPD2Q9BTF0 503 aaKnown RBP9.8□□□□□ -0.84
CD46-209ENST00000367047 CD109Q6YHK3 1445 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 MED14O60244 1454 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 ADCY10Q96PN6 1610 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 LARGE1O95461 756 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 USP8P40818 1118 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 ANKRD44Q8N8A2 993 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 PRAM1Q96QH2 718 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 RBM28Q9NW13 759 aaKnown RBP9.8□□□□□ -0.84
CD46-209ENST00000367047 IL16Q14005 1332 aa9.8□□□□□ -0.84
CD46-209ENST00000367047 PSDA5PKW4 1024 aaPredicted RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 CHMLP26374 656 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 TMC6Q7Z403 805 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 C14orf37Q86TY3 774 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 PLEKHF1Q96S99 279 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 KCND1Q9NSA2 647 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 ADGBQ8N7X0 1667 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 YEATS2Q9ULM3 1422 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 TULP1O00294 542 aaPredicted RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 FANCGO15287 622 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 NRDCO43847 1150 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 PPFIA4O75335 1185 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 PAX7P23759 505 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 EIF5P55010 431 aaKnown RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 SETQ01105 290 aaPredicted RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 HSP90B2PQ58FF3 399 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 LARP1BQ659C4 914 aaKnown RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 KCNV1Q6PIU1 500 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 CPLX2Q6PUV4 134 aaKnown RBP9.79□□□□□ -0.84
CD46-209ENST00000367047 NBPF11Q86T75 865 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 MIEF2Q96C03 454 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 KRT24Q2M2I5 525 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 ARMCX5Q6P1M9 558 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 SUGCTQ9HAC7 445 aa9.79□□□□□ -0.84
CD46-209ENST00000367047 REREQ9P2R6 1566 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 ABCC4O15439 1325 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 PPP2R3AQ06190 1150 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 CEP85Q6P2H3 762 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 GNL3LQ9NVN8 582 aaKnown RBP9.78□□□□□ -0.84
CD46-209ENST00000367047 PHLPP2Q6ZVD8 1323 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 EXOC5O00471 708 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 MAP2K7O14733 419 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 ERC1Q8IUD2 1116 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 NECAB1Q8N987 351 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 IL25Q9H293 177 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 CLTCL1P53675 1640 aa9.78□□□□□ -0.84
CD46-209ENST00000367047 EIF2AK4Q9P2K8 1649 aaKnown RBP9.78□□□□□ -0.84
CD46-209ENST00000367047 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 TRIM65Q6PJ69 517 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 CDC37L1Q7L3B6 337 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 AOPEPQ8N6M6 819 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 JMYQ8N9B5 988 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 PRPF38AQ8NAV1 312 aaKnown RBP9.77□□□□□ -0.84
CD46-209ENST00000367047 DDX54Q8TDD1 881 aaKnown RBP9.77□□□□□ -0.84
CD46-209ENST00000367047 N4BP2L2Q92802 583 aaPredicted RBP9.77□□□□□ -0.84
CD46-209ENST00000367047 PLCD4Q9BRC7 762 aa9.77□□□□□ -0.84
CD46-209ENST00000367047 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.84
CD46-209ENST00000367047 SHPRHQ149N8 1683 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 EIF3JO75822 258 aaKnown RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 TUBB4AP04350 444 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 GNAI1P63096 354 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 SCRN1Q12765 414 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 RBM43Q6ZSC3 357 aaKnown RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 HDXQ7Z353 690 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 RPAP2Q8IXW5 612 aaPredicted RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 CTCFLQ8NI51 663 aaPredicted RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 ERCC4Q92889 916 aaPredicted RBP9.77□□□□□ -0.85
CD46-209ENST00000367047 FAXDC2Q96IV6 333 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 RABEP2Q9H5N1 569 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 FAM204AQ9H8W3 233 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 TTC41PQ6P2S7 1318 aa9.77□□□□□ -0.85
CD46-209ENST00000367047 CCDC151A5D8V7 595 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 CAVIN2O95810 425 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 ELF1P32519 619 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 VPS53Q5VIR6 699 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 CLIC6Q96NY7 704 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 FMNL2Q96PY5 1086 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 HSPA4P34932 840 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 GNG11P61952 73 aa9.76□□□□□ -0.85
CD46-209ENST00000367047 ATP2B2Q01814 1243 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms