RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 ARSJQ5FYB0 599 aaPredicted RBP12.19□□□□□ -0.46
H3F3A-201ENST00000366813 EFCAB2Q5VUJ9 269 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 NFATC2IPQ8NCF5 419 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 ABHD17AQ96GS6 310 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 NPATQ14207 1427 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 ZMYM3Q14202 1370 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 CPS1P31327 1500 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 SETD1AO15047 1707 aaKnown RBP12.18□□□□□ -0.46
H3F3A-201ENST00000366813 GTF2IP78347 998 aa12.18□□□□□ -0.46
H3F3A-201ENST00000366813 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
H3F3A-201ENST00000366813 DNMT3AQ9Y6K1 912 aaPredicted RBP12.18□□□□□ -0.46
H3F3A-201ENST00000366813 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
H3F3A-201ENST00000366813 CNTLNQ9NXG0 1405 aa12.17□□□□□ -0.46
H3F3A-201ENST00000366813 BNIP3LO60238 219 aa12.17□□□□□ -0.46
H3F3A-201ENST00000366813 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
H3F3A-201ENST00000366813 FGFR3P22607 806 aa12.17□□□□□ -0.46
H3F3A-201ENST00000366813 NCOA4Q13772 614 aa12.17□□□□□ -0.46
H3F3A-201ENST00000366813 UBAP2LQ14157 1087 aaKnown RBP12.17□□□□□ -0.46
H3F3A-201ENST00000366813 GALNT6Q8NCL4 622 aa12.17□□□□□ -0.46
H3F3A-201ENST00000366813 GDF2Q9UK05 429 aaPredicted RBP12.17□□□□□ -0.46
H3F3A-201ENST00000366813 DEPDC4Q8N2C3 294 aa12.16□□□□□ -0.46
H3F3A-201ENST00000366813 ZCCHC2Q9C0B9 1178 aaKnown RBP12.16□□□□□ -0.46
H3F3A-201ENST00000366813 C1orf115Q9H7X2 142 aa12.16□□□□□ -0.46
H3F3A-201ENST00000366813 PCDHGC4Q9Y5F7 938 aa12.16□□□□□ -0.46
H3F3A-201ENST00000366813 AGLP35573 1532 aa12.16□□□□□ -0.46
H3F3A-201ENST00000366813 GPAT2Q6NUI2 795 aa12.15□□□□□ -0.46
H3F3A-201ENST00000366813 NLRP8Q86W28 1048 aa12.15□□□□□ -0.46
H3F3A-201ENST00000366813 ZNF777Q9ULD5 760 aaPredicted RBP12.15□□□□□ -0.46
H3F3A-201ENST00000366813 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.46
H3F3A-201ENST00000366813 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
H3F3A-201ENST00000366813 CTBSQ01459 385 aa12.14□□□□□ -0.47
H3F3A-201ENST00000366813 MTFR1Q15390 333 aa12.14□□□□□ -0.47
H3F3A-201ENST00000366813 GOLGA6L1Q8N7Z2 621 aa12.14□□□□□ -0.47
H3F3A-201ENST00000366813 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
H3F3A-201ENST00000366813 REREQ9P2R6 1566 aa12.14□□□□□ -0.47
H3F3A-201ENST00000366813 A0A1W2PNR3 127 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 ATXN7O15265 892 aaPredicted RBP12.13□□□□□ -0.47
H3F3A-201ENST00000366813 HDGFL1Q5TGJ6 251 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 RRAGCQ9HB90 399 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
H3F3A-201ENST00000366813 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
H3F3A-201ENST00000366813 ATP4AP20648 1035 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
H3F3A-201ENST00000366813 FOXK2Q01167 660 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 BICDL1Q6ZP65 573 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 PARP3Q9Y6F1 533 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 KDM5CP41229 1560 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 ABCA6Q8N139 1617 aa12.12□□□□□ -0.47
H3F3A-201ENST00000366813 POM121CA8CG34 1229 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 ZNF358Q9NW07 568 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
H3F3A-201ENST00000366813 MYO3AQ8NEV4 1616 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 C2CD2LO14523 706 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 IGHA1P01876 353 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 AMPD1P23109 780 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 SUPT6HQ7KZ85 1726 aaKnown RBP12.11□□□□□ -0.47
H3F3A-201ENST00000366813 USP3Q9Y6I4 520 aa12.11□□□□□ -0.47
H3F3A-201ENST00000366813 ZNF142P52746 1687 aaPredicted RBP12.1□□□□□ -0.47
H3F3A-201ENST00000366813 SAMD9Q5K651 1589 aa12.1□□□□□ -0.47
H3F3A-201ENST00000366813 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
H3F3A-201ENST00000366813 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
H3F3A-201ENST00000366813 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
H3F3A-201ENST00000366813 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
H3F3A-201ENST00000366813 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
H3F3A-201ENST00000366813 DNAAF2Q9NVR5 837 aaKnown RBP12.09□□□□□ -0.47
H3F3A-201ENST00000366813 SCHIP1Q9P0W5 487 aaPredicted RBP12.09□□□□□ -0.47
H3F3A-201ENST00000366813 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
H3F3A-201ENST00000366813 MLH3Q9UHC1 1453 aa12.09□□□□□ -0.47
H3F3A-201ENST00000366813 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 DCDC2BA2VCK2 349 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 ATP1A2P50993 1020 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 NEUROD4Q9HD90 331 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 MKL2Q9ULH7 1088 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 ZNF232Q9UNY5 417 aa12.08□□□□□ -0.48
H3F3A-201ENST00000366813 MAPTP10636 758 aaKnown RBP12.07□□□□□ -0.48
H3F3A-201ENST00000366813 ZNF295-AS1Q8N0V1 137 aa12.07□□□□□ -0.48
H3F3A-201ENST00000366813 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
H3F3A-201ENST00000366813 NEURL4Q96JN8 1562 aa12.07□□□□□ -0.48
H3F3A-201ENST00000366813 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
H3F3A-201ENST00000366813 SNRPNP63162 240 aaKnown RBP12.06□□□□□ -0.48
H3F3A-201ENST00000366813 TNP2Q05952 138 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 TPCN2Q8NHX9 752 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 ADAMTS19Q8TE59 1207 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 L3MBTL2Q969R5 705 aa12.06□□□□□ -0.48
H3F3A-201ENST00000366813 LRRC7Q96NW7 1537 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 ARAFP10398 606 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 NOS2P35228 1153 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 CCDC102BQ68D86 513 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 SLC9A9Q8IVB4 645 aa12.05□□□□□ -0.48
H3F3A-201ENST00000366813 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms