RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PPP4R3BQ5MIZ7 849 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 SPC24Q8NBT2 197 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 PCMTD1Q96MG8 357 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 BOLA2Q9H3K6 86 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 PTPRMP28827 1452 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 SSH3Q8TE77 659 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 CHPF2Q9P2E5 772 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 METP08581 1390 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 IMMTQ16891 758 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 AMOTL1Q8IY63 956 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 PLCD3Q8N3E9 789 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 SIL1Q9H173 461 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ANO10Q9NW15 660 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 RNMTO43148 476 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 F13A1P00488 732 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 KRT24Q2M2I5 525 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ATL3Q6DD88 541 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 G2E3Q7L622 706 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ANKRD20A12PQ8NF67 263 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 IPO4Q8TEX9 1081 aaKnown RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 WASF1Q92558 559 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 PRIMPOLQ96LW4 560 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 DIP2CQ9Y2E4 1556 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 KIF2AO00139 706 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 CBFA2T2O43439 604 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 PPP1R9BQ96SB3 815 aa6.27□□□□□ -1.41
CDC42BPA-204ENST00000366767 ERLIN1O75477 346 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 STK38Q15208 465 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 MEX3CQ5U5Q3 659 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 CCDC8Q9H0W5 538 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 TOMM22Q9NS69 142 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 IFIT1P09914 478 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 FBXW7Q969H0 707 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 DDX11Q96FC9 970 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 BRMS1Q9HCU9 246 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 ANKARQ7Z5J8 1434 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 ZFYP08048 801 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 TICAM2Q86XR7 235 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 GTPBP4Q9BZE4 634 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 FOXO3O43524 673 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 CLEC17AQ6ZS10 378 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 RBM8AQ9Y5S9 174 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 NCKAP5LQ9HCH0 1330 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 SGSM2O43147 1006 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 STARD3NLO95772 234 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 HSPA4P34932 840 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 DHX37Q8IY37 1157 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 ANKRD13DQ6ZTN6 518 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 RUFY3Q7L099 469 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 USP48Q86UV5 1035 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 CEP57L1Q8IYX8 460 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 DYNC1I1O14576 645 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 BRD1O95696 1058 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 PDILTQ8N807 584 aa6.26□□□□□ -1.41
CDC42BPA-204ENST00000366767 TOM1L2Q6ZVM7 507 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 NACAP1Q9BZK3 213 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 CNNM1Q9NRU3 951 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 LMBRD1Q9NUN5 540 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 CCDC9Q9Y3X0 531 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 GCP02774 474 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 AK2P54819 239 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 FRMPD1Q5SYB0 1578 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 EIF4A1P60842 406 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 MCMDC2Q4G0Z9 681 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 PIP4K2AP48426 406 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 NOL10Q9BSC4 688 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 PRM3Q9NNZ6 103 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 CWC25Q9NXE8 425 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 PIK3C2BO00750 1634 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 A0A087WZG4 1122 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 USP31Q70CQ4 1352 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 ZC3H6P61129 1189 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 CADPS2Q86UW7 1296 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 PRIM1P49642 420 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 STK3Q13188 491 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 PANK2Q9BZ23 570 aa6.25□□□□□ -1.41
CDC42BPA-204ENST00000366767 TTF1Q15361 905 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 TTLL5Q6EMB2 1281 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 FAM107BQ9H098 131 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 SNX14Q9Y5W7 946 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 OFD1O75665 1012 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 KCNA6P17658 529 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 CUL4AQ13619 759 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 ZGPATQ8N5A5 531 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 SPDYE4A6NLX3 237 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 GTF2F1P35269 517 aaKnown RBP eCLIP6.24□□□□□ -1.413e-27■■■■■ 35.2
CDC42BPA-204ENST00000366767 IL15P40933 162 aaPredicted RBP6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 TMCO3Q6UWJ1 677 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 SIRT2Q8IXJ6 389 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 TRIM22Q8IYM9 498 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 SHTN1A0MZ66 631 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 ME1P48163 572 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 NAP1L1P55209 391 aaKnown RBP6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 LRRC7Q96NW7 1537 aa6.24□□□□□ -1.41
CDC42BPA-204ENST00000366767 SMC2O95347 1197 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms