RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 PPARGC1BQ86YN6 1023 aaKnown RBP2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 CLEC10AQ8IUN9 316 aa2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 AGGF1Q8N302 714 aaeCLIP2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 NAF1Q96HR8 494 aaKnown RBP2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 CEP41Q9BYV8 373 aa2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 UBE2OQ9C0C9 1292 aaKnown RBP2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 SLC6A14Q9UN76 642 aa2.97□□□□□ -1.93
RNU6-228P-201ENST00000362700 NFIBO00712 420 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 SEMA3EO15041 775 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 TRAK2O60296 914 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 DEAF1O75398 565 aaPredicted RBP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 TATP17735 454 aaPredicted RBP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 SPEM2Q0P670 501 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 MAP2K5Q13163 448 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 PUM1Q14671 1186 aaKnown RBP eCLIP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 RTN1Q16799 776 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 SKOR2Q2VWA4 1001 aaPredicted RBP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 NBPF1Q3BBV0 1214 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 CIAPIN1Q6FI81 312 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 SYDE1Q6ZW31 735 aaPredicted RBP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 RAB44Q7Z6P3 723 aaPredicted RBP2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 FAM83CQ9BQN1 747 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 OSBPL3Q9H4L5 887 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 SRRDQ9UH36 339 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 HRH3Q9Y5N1 445 aa2.96□□□□□ -1.94
RNU6-228P-201ENST00000362700 A0A0G2JLL6 359 aaPredicted RBP2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 DCAF8L2P0C7V8 631 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 SCTRP47872 440 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 CPSF6Q16630 551 aaKnown RBP eCLIP2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 SMYD5Q6GMV2 418 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 XAGE2Q96GT9 111 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 OSBPL1AQ9BXW6 950 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 ZCCHC4Q9H5U6 513 aa2.95□□□□□ -1.94
RNU6-228P-201ENST00000362700 NUTM2BA6NNL0 878 aaPredicted RBP2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 NUTM2EB1AL46 878 aaPredicted RBP2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 NPIPB6E9PJ23 425 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 SOCS7O14512 581 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 C1QTNF9P0C862 333 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 DIXDC1Q155Q3 683 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 NUTM2DQ5VT03 806 aaPredicted RBP2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 ERICH6BQ5W0A0 696 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 NUTM2AQ8IVF1 878 aaPredicted RBP2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 GLIS3Q8NEA6 775 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 KCNV2Q8TDN2 545 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 DCAF11Q8TEB1 546 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 MFSD14AQ96MC6 490 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 IGFLR1Q9H665 355 aa2.94□□□□□ -1.94
RNU6-228P-201ENST00000362700 CNTNAP4Q9C0A0 1308 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 IRF6O14896 467 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 CELA3BP08861 270 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 INSRRP14616 1297 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 SSTR3P32745 418 aaPredicted RBP2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 CSPP1Q1MSJ5 1256 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 CRTC2Q53ET0 693 aaPredicted RBP2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 BICDL1Q6ZP65 573 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 KCNF1Q9H3M0 494 aa2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.93□□□□□ -1.94
RNU6-228P-201ENST00000362700 GIGYF1O75420 1035 aaPredicted RBP2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 HMGA2P52926 109 aa2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 ESCO1Q5FWF5 840 aa2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 CXorf38Q8TB03 319 aa2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 NIFKQ9BYG3 293 aaKnown RBP2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 RC3H2Q9HBD1 1191 aaKnown RBP2.92□□□□□ -1.94
RNU6-228P-201ENST00000362700 SFSWAPQ12872 951 aaKnown RBP2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 TLR1Q15399 786 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 TMEM259Q4ZIN3 620 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 RNF20Q5VTR2 975 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 BEND4Q6ZU67 534 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 FAM20CQ8IXL6 584 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 ZDHHC3Q9NYG2 299 aa2.91□□□□□ -1.94
RNU6-228P-201ENST00000362700 CYP26A1O43174 497 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 GPIHBP1Q8IV16 184 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 FAM46AQ96IP4 442 aaKnown RBP2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 TBC1D2Q9BYX2 928 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 NAGPAQ9UK23 515 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 MYRFQ9Y2G1 1151 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 PITPNM2Q9BZ72 1349 aa2.9□□□□□ -1.95
RNU6-228P-201ENST00000362700 TGM1P22735 817 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 ZXDAP98168 799 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 KCNA10Q16322 511 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 FBXL6Q8N531 539 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 BHMTQ93088 406 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 SORCS2Q96PQ0 1159 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 METTL22Q9BUU2 404 aaPredicted RBP2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 RTEL1Q9NZ71 1219 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 SLC5A6Q9Y289 635 aa2.89□□□□□ -1.95
RNU6-228P-201ENST00000362700 BMP7P18075 431 aa2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 GRIK5Q16478 980 aa2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 ZSWIM9Q86XI8 627 aa2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 SLITRK6Q9H5Y7 841 aa2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 SRA1Q9HD15 236 aaKnown RBP2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 DNAJB12Q9NXW2 375 aaKnown RBP2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 PCDHB11Q9Y5F2 797 aa2.88□□□□□ -1.95
RNU6-228P-201ENST00000362700 NUAK1O60285 661 aa2.87□□□□□ -1.95
RNU6-228P-201ENST00000362700 KRT1P04264 644 aa2.87□□□□□ -1.95
RNU6-228P-201ENST00000362700 F13BP05160 661 aa2.87□□□□□ -1.95
RNU6-228P-201ENST00000362700 BMP3P12645 472 aa2.87□□□□□ -1.95
RNU6-228P-201ENST00000362700 HNRNPA0Q13151 305 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms