RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 IDEP14735 1019 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 HMGN5P82970 282 aaKnown RBP12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 FGFR1OPO95684 399 aaKnown RBP12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 CETN1Q12798 172 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 ZNF408Q9H9D4 720 aa12.25□□□□□ -0.45
CACNA1S-201ENST00000362061 B4DLN1 442 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 SH2B1Q9NRF2 756 aaPredicted RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 EPB41L2O43491 1005 aaKnown RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 HSP90AA2PQ14568 343 aaPredicted RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 CDCA7Q9BWT1 371 aaPredicted RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 SLC4A4Q9Y6R1 1079 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 CFAP100Q494V2 611 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 STXBP4Q6ZWJ1 553 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 VPS36Q86VN1 386 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 BICD1Q96G01 975 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 RBM17Q96I25 401 aaKnown RBP12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 FERMT2Q96AC1 680 aa12.24□□□□□ -0.45
CACNA1S-201ENST00000362061 CCDC178Q5BJE1 867 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 TNNI2P48788 182 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 ENOX2Q16206 610 aaKnown RBP12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 CNBD1Q8NA66 436 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 UHRF1BP1Q6BDS2 1440 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 BAG6P46379 1132 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 METAP2P50579 478 aaKnown RBP eCLIP12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 DCAF5Q96JK2 942 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 TCERG1LQ5VWI1 586 aa12.23□□□□□ -0.45
CACNA1S-201ENST00000362061 IRS4O14654 1257 aaPredicted RBP12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 AMPD3Q01432 767 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 RAB11FIP4Q86YS3 637 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 FILIP1Q7Z7B0 1213 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 TAX1BP1Q86VP1 789 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 CAMK4Q16566 473 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 GBP2P32456 591 aaPredicted RBP12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 WTAPQ15007 396 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 ANKRD2Q9GZV1 360 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 USP21Q9UK80 565 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 TRIM27P14373 513 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 UBA7P41226 1012 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 SPA17Q15506 151 aa12.22□□□□□ -0.45
CACNA1S-201ENST00000362061 USP8P40818 1118 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 KSR2Q6VAB6 950 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 ESR2Q92731 530 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 CENPHQ9H3R5 247 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 ZFYP08048 801 aaPredicted RBP12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 PLCG2P16885 1265 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 IL15P40933 162 aaPredicted RBP12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 MAP3K11Q16584 847 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 GRM8O00222 908 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 MPNDQ8N594 471 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 KRT23Q9C075 422 aa12.21□□□□□ -0.45
CACNA1S-201ENST00000362061 APBA3O96018 575 aa12.21□□□□□ -0.46
CACNA1S-201ENST00000362061 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.46
CACNA1S-201ENST00000362061 TTC16Q8NEE8 873 aa12.21□□□□□ -0.46
CACNA1S-201ENST00000362061 ERMNQ8TAM6 284 aa12.21□□□□□ -0.46
CACNA1S-201ENST00000362061 SMARCC2Q8TAQ2 1214 aa12.21□□□□□ -0.46
CACNA1S-201ENST00000362061 TBCAO75347 108 aaKnown RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 EZRP15311 586 aaKnown RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 ARHGAP29Q52LW3 1261 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 PUF60Q9UHX1 559 aaKnown RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 HELBQ8NG08 1087 aaPredicted RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 SCAND2PQ9GZW5 306 aaPredicted RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 CNNM3Q8NE01 707 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 MACROD2A1Z1Q3 448 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 CCDC112Q8NEF3 446 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 LIMCH1Q9UPQ0 1083 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 NKTRP30414 1462 aaKnown RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 SLC9C2Q5TAH2 1124 aa12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 ORC3Q9UBD5 711 aaPredicted RBP12.2□□□□□ -0.46
CACNA1S-201ENST00000362061 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 NBPF7P0C2Y1 421 aaPredicted RBP12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 EIF6P56537 245 aaKnown RBP12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 MAGEB6P1A0A0J9YX57 407 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 FLT4P35916 1363 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 MCM5P33992 734 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 CCDC191Q8NCU4 936 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 RHPN1Q8TCX5 695 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 LDHBP07195 334 aaKnown RBP12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 JAG2Q9Y219 1238 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 GPR162Q16538 588 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 HEATR3Q7Z4Q2 680 aa12.19□□□□□ -0.46
CACNA1S-201ENST00000362061 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms