RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
COL11A2-202ENST00000361917 PUF60Q9UHX1 559 aaKnown RBP17.12■□□□□ 0.33
COL11A2-202ENST00000361917 NOP2P46087 812 aaKnown RBP17.12■□□□□ 0.33
COL11A2-202ENST00000361917 PPP1R42Q7Z4L9 355 aa17.12■□□□□ 0.33
COL11A2-202ENST00000361917 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
COL11A2-202ENST00000361917 PDE4BQ07343 736 aa17.11■□□□□ 0.33
COL11A2-202ENST00000361917 NCOA7Q8NI08 942 aa17.11■□□□□ 0.33
COL11A2-202ENST00000361917 CETN1Q12798 172 aa17.1■□□□□ 0.33
COL11A2-202ENST00000361917 SPECC1Q5M775 1068 aa17.1■□□□□ 0.33
COL11A2-202ENST00000361917 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-202ENST00000361917 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
COL11A2-202ENST00000361917 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
COL11A2-202ENST00000361917 SMC1AQ14683 1233 aaKnown RBP17.1■□□□□ 0.33
COL11A2-202ENST00000361917 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
COL11A2-202ENST00000361917 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
COL11A2-202ENST00000361917 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
COL11A2-202ENST00000361917 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
COL11A2-202ENST00000361917 STAMBPO95630 424 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 GSDMDP57764 484 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 TTC22Q5TAA0 569 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 ANXA1P04083 346 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 KRT28Q7Z3Y7 464 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 MYO1BO43795 1136 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 PSMD1Q99460 953 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 BAG3O95817 575 aa17.09■□□□□ 0.33
COL11A2-202ENST00000361917 UBA7P41226 1012 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 SNW1Q13573 536 aaKnown RBP17.08■□□□□ 0.33
COL11A2-202ENST00000361917 ZNF622Q969S3 477 aaKnown RBP eCLIP17.08■□□□□ 0.33
COL11A2-202ENST00000361917 CABP5Q9NP86 173 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 HMGXB3Q12766 1538 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 NF2P35240 595 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 MAATS1Q7Z4T9 603 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 JADE2Q9NQC1 790 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 COMMD10Q9Y6G5 202 aa17.08■□□□□ 0.33
COL11A2-202ENST00000361917 PIK3R4Q99570 1358 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 IFNL2Q8IZJ0 200 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 TAOK3Q9H2K8 898 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 CTR9Q6PD62 1173 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 NAA15Q9BXJ9 866 aaKnown RBP17.08■□□□□ 0.32
COL11A2-202ENST00000361917 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 PTPN23Q9H3S7 1636 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 BICD1Q96G01 975 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 ZSWIM4Q9H7M6 989 aa17.08■□□□□ 0.32
COL11A2-202ENST00000361917 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
COL11A2-202ENST00000361917 NEMFO60524 1076 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 IGHDP01880 384 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 HLA-DOAP06340 250 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-202ENST00000361917 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 EXOC1Q9NV70 894 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 LDHCP07864 332 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 TICAM2Q86XR7 235 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
COL11A2-202ENST00000361917 PRXQ9BXM0 1461 aa17.07■□□□□ 0.32
COL11A2-202ENST00000361917 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 TRIM47Q96LD4 638 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 TTC21BQ7Z4L5 1316 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 ZNF165P49910 485 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 ANKRD24Q8TF21 1146 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 PCF11O94913 1555 aaKnown RBP17.06■□□□□ 0.32
COL11A2-202ENST00000361917 AFMP43652 599 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 GIMAP6Q6P9H5 292 aa17.06■□□□□ 0.32
COL11A2-202ENST00000361917 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-202ENST00000361917 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
COL11A2-202ENST00000361917 RFC4P35249 363 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 HSP90AA4PQ58FG1 418 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 BMP2KLQ5H9B9 411 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 KIF14Q15058 1648 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 UBE2HP62256 183 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 NOS1P29475 1434 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 POTEB2H3BUK9 544 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 TBCAO75347 108 aaKnown RBP17.05■□□□□ 0.32
COL11A2-202ENST00000361917 WTAPQ15007 396 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
COL11A2-202ENST00000361917 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
COL11A2-202ENST00000361917 MCM5P33992 734 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 CCDC175P0C221 793 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 ZSCAN23Q3MJ62 389 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 ADGRL1O94910 1474 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 FBLN1P23142 703 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 MICALCLQ6ZW33 695 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 BRF1Q92994 677 aa17.04■□□□□ 0.32
COL11A2-202ENST00000361917 STX8Q9UNK0 236 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms