RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 CEP135Q66GS9 1140 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 ORC3Q9UBD5 711 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PLEKHH2Q8IVE3 1493 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 CETN2P41208 172 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 IARSP41252 1262 aaKnown RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 VPS36Q86VN1 386 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PI4KAP2A4QPH2 592 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 F8W031 263 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 KCNA4P22459 653 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 LMAN1P49257 510 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 TTC22Q5TAA0 569 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PI4KAP1Q8N8J0 262 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 CCDC12Q8WUD4 166 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 NEK1Q96PY6 1258 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 INCENPQ9NQS7 918 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PAFAH1B1P43034 410 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 SYCP3Q8IZU3 236 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 GPATCH11Q8N954 259 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 RGS22Q8NE09 1264 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 KAT14Q9H8E8 782 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 CHRNA2Q15822 529 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 EFCAB5A4FU69 1503 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 FAM135AQ9P2D6 1515 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 DISP3Q9P2K9 1392 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PLEKHH1Q9ULM0 1364 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 PCF11O94913 1555 aaKnown RBP9.28□□□□□ -0.92
CTNND1-204ENST00000361796 RPGRIP1LQ68CZ1 1315 aa9.28□□□□□ -0.92
CTNND1-204ENST00000361796 LDHAL6AQ6ZMR3 332 aa9.27□□□□□ -0.92
CTNND1-204ENST00000361796 CALML4Q96GE6 196 aa9.27□□□□□ -0.92
CTNND1-204ENST00000361796 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.92
CTNND1-204ENST00000361796 HYPKQ9NX55 129 aa9.27□□□□□ -0.92
CTNND1-204ENST00000361796 POLA1P09884 1462 aaPredicted RBP9.27□□□□□ -0.92
CTNND1-204ENST00000361796 ZNF710Q8N1W2 664 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 CAMSAP2Q08AD1 1489 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 NF2P35240 595 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 ANO6Q4KMQ2 910 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 MFSD6Q6ZSS7 791 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 IPO4Q8TEX9 1081 aaKnown RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 ECHDC1Q9NTX5 307 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 V9GYY5 206 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 ZNF165P49910 485 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 GNG11P61952 73 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 CHST3Q7LGC8 479 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 CCDC150Q8NCX0 1101 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 ALS2CR12Q96Q35 445 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 PTGS1P23219 599 aa9.27□□□□□ -0.93
CTNND1-204ENST00000361796 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 DDX19AQ9NUU7 478 aaKnown RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 DBF4Q9UBU7 674 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-204ENST00000361796 SBNO2Q9Y2G9 1366 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 SMARCC1Q92922 1105 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 FEZ1Q99689 392 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 RAB34Q9BZG1 259 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 CHPF2Q9P2E5 772 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 AMOTL2Q9Y2J4 779 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 KLF18A0A0U1RQI7 1052 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 GCOM1H8Y6P7 765 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 CTAGE5O15320 804 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 MYZAPP0CAP1 466 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 BRF1Q92994 677 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TMX3Q96JJ7 454 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 CWC25Q9NXE8 425 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TRIM21P19474 475 aaKnown RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 RRAGBQ5VZM2 374 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TRIM47Q96LD4 638 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 RNF41Q9H4P4 317 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 COMMD10Q9Y6G5 202 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 HOOK3Q86VS8 718 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 BICD1Q96G01 975 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 MEIS3Q99687 375 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TNNQ9UQP3 1299 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TMEM110-MUSTN1A8MSY1 372 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 FGFR1OPO95684 399 aaKnown RBP9.26□□□□□ -0.93
CTNND1-204ENST00000361796 SDSP20132 328 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 ACSBG1Q96GR2 724 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 TCP11L1Q9NUJ3 509 aa9.26□□□□□ -0.93
CTNND1-204ENST00000361796 GJC1P36383 396 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 USP48Q86UV5 1035 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 ZNF622Q969S3 477 aaKnown RBP eCLIP9.25□□□□□ -0.933e-7■□□□□ 10.1
CTNND1-204ENST00000361796 PAIP2Q9BPZ3 127 aaKnown RBP9.25□□□□□ -0.93
CTNND1-204ENST00000361796 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 PTPRCP08575 1304 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 EPRSP07814 1512 aaKnown RBP9.25□□□□□ -0.93
CTNND1-204ENST00000361796 PICALMQ13492 652 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 NCOA7Q8NI08 942 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 HEATR3Q7Z4Q2 680 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 EXOC1Q9NV70 894 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 WASLO00401 505 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-204ENST00000361796 ARID5AQ03989 594 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 CEP63Q96MT8 703 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
CTNND1-204ENST00000361796 ZSCAN22P10073 491 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms