RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 PNMA6EA0A0J9YXQ4 647 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 TOM1O60784 492 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 AEBP1Q8IUX7 1158 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 CCDC83Q8IWF9 413 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 RBM33Q96EV2 1170 aaKnown RBP14.57□□□□□ -0.08
RBM39-203ENST00000361162 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
RBM39-203ENST00000361162 KDM3BQ7LBC6 1761 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 TPD52L1Q16890 204 aaPredicted RBP14.57□□□□□ -0.08
RBM39-203ENST00000361162 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 NUTM1Q86Y26 1132 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 CCDC112Q8NEF3 446 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 NECTIN2Q92692 538 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 TRIM5Q9C035 493 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 COL5A2P05997 1499 aaPredicted RBP14.57□□□□□ -0.08
RBM39-203ENST00000361162 MRC1P22897 1456 aa14.57□□□□□ -0.08
RBM39-203ENST00000361162 SHANK3Q9BYB0 1731 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 CCDC192P0DO97 292 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 ANAPC15P60006 121 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 RGS12O14924 1447 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 CDK11BP21127 795 aaKnown RBP14.56□□□□□ -0.08
RBM39-203ENST00000361162 AMPHP49418 695 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 IRX5P78411 483 aaPredicted RBP14.56□□□□□ -0.08
RBM39-203ENST00000361162 LRRC59Q96AG4 307 aaKnown RBP14.56□□□□□ -0.08
RBM39-203ENST00000361162 SCN11AQ9UI33 1791 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 LIG1P18858 919 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 BABAM1Q9NWV8 329 aa14.56□□□□□ -0.08
RBM39-203ENST00000361162 ARID5BQ14865 1188 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 KIF18AQ8NI77 898 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
RBM39-203ENST00000361162 SPG7Q9UQ90 795 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 SMTNL1A8MU46 457 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 GJB2P29033 226 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 TERF2Q15554 542 aa14.55□□□□□ -0.08
RBM39-203ENST00000361162 SNX14Q9Y5W7 946 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 USP27XA6NNY8 438 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 TPM3P06753 285 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 TYRO3Q06418 890 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 KMT5BQ4FZB7 885 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 ANO6Q4KMQ2 910 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 ZSCAN25Q6NSZ9 544 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 NECAB1Q8N987 351 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 CACTINQ8WUQ7 758 aaKnown RBP14.54□□□□□ -0.08
RBM39-203ENST00000361162 MRVI1Q9Y6F6 885 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 ERBB3P21860 1342 aa14.54□□□□□ -0.08
RBM39-203ENST00000361162 SOS1Q07889 1333 aaPredicted RBP14.54□□□□□ -0.08
RBM39-203ENST00000361162 PAPPAQ13219 1627 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 HSPA4P34932 840 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 FAM200AQ8TCP9 573 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 CBX8Q9HC52 389 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 TFIP11Q9UBB9 837 aaKnown RBP14.53□□□□□ -0.08
RBM39-203ENST00000361162 ZNF215Q9UL58 517 aaPredicted RBP14.53□□□□□ -0.08
RBM39-203ENST00000361162 GABPB1Q06547 395 aaPredicted RBP14.53□□□□□ -0.08
RBM39-203ENST00000361162 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
RBM39-203ENST00000361162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.082e-26■■■□□ 15.2
RBM39-203ENST00000361162 LIMCH1Q9UPQ0 1083 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 MTMR6Q9Y217 621 aa14.53□□□□□ -0.08
RBM39-203ENST00000361162 N4BP2Q86UW6 1770 aaPredicted RBP14.53□□□□□ -0.08
RBM39-203ENST00000361162 CCDC144BQ3MJ40 725 aa14.52□□□□□ -0.08
RBM39-203ENST00000361162 TAF3Q5VWG9 929 aa14.52□□□□□ -0.08
RBM39-203ENST00000361162 CCDC144CPQ8IYA2 1237 aa14.52□□□□□ -0.08
RBM39-203ENST00000361162 MORC2Q9Y6X9 1032 aaPredicted RBP14.52□□□□□ -0.08
RBM39-203ENST00000361162 GNAI2P04899 355 aa14.52□□□□□ -0.09
RBM39-203ENST00000361162 CASTP20810 708 aaKnown RBP14.52□□□□□ -0.09
RBM39-203ENST00000361162 TTC6Q86TZ1 520 aa14.52□□□□□ -0.09
RBM39-203ENST00000361162 SYTL4Q96C24 671 aaPredicted RBP14.52□□□□□ -0.09
RBM39-203ENST00000361162 SALL3Q9BXA9 1300 aa14.52□□□□□ -0.09
RBM39-203ENST00000361162 CICQ96RK0 1608 aaPredicted RBP14.52□□□□□ -0.09
RBM39-203ENST00000361162 MAP3K11Q16584 847 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 HSP90AB2PQ58FF8 381 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 SULT6B1Q6IMI4 303 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 CWC27Q6UX04 472 aaKnown RBP14.51□□□□□ -0.09
RBM39-203ENST00000361162 DACT1Q9NYF0 836 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 NUP62CLQ9H1M0 184 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.51□□□□□ -0.09
RBM39-203ENST00000361162 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 CEP135Q66GS9 1140 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 AEBP2Q6ZN18 517 aaPredicted RBP14.51□□□□□ -0.09
RBM39-203ENST00000361162 KRT222Q8N1A0 295 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 TTC14Q96N46 770 aa14.51□□□□□ -0.09
RBM39-203ENST00000361162 ELF2Q15723 593 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 CLIP2Q9UDT6 1046 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 CHL1O00533 1208 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 ZNF75DP51815 510 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 ADCK5Q3MIX3 580 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 DNAJC25Q9H1X3 360 aa14.5□□□□□ -0.09
RBM39-203ENST00000361162 A0A087WWV3 80 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 SOX12O15370 315 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 COL9A3Q14050 684 aaPredicted RBP14.49□□□□□ -0.09
RBM39-203ENST00000361162 AMOTQ4VCS5 1084 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 FBXO38Q6PIJ6 1188 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 EYA1Q99502 592 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 TNMDQ9H2S6 317 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 LRRFIP2Q9Y608 721 aaKnown RBP14.49□□□□□ -0.09
RBM39-203ENST00000361162 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
RBM39-203ENST00000361162 KIAA0232Q92628 1395 aa14.48□□□□□ -0.09
RBM39-203ENST00000361162 JCADQ9P266 1359 aa14.48□□□□□ -0.09
RBM39-203ENST00000361162 RBM6P78332 1123 aaKnown RBP14.48□□□□□ -0.09
RBM39-203ENST00000361162 TCEANC2Q96MN5 208 aa14.48□□□□□ -0.09
RBM39-203ENST00000361162 SLIT2O94813 1529 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms