RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 PARP10Q53GL7 1025 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 BEND3Q5T5X7 828 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 CNBD1Q8NA66 436 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 FAM89AQ96GI7 184 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 TRMT112Q9UI30 125 aaKnown RBP8.17□□□□□ -1.1
SUDS3-201ENST00000360286 RCAN3Q9UKA8 241 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 PTPRCP08575 1304 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 LRP5O75197 1615 aa8.17□□□□□ -1.1
SUDS3-201ENST00000360286 HCLS1P14317 486 aaPredicted RBP8.16□□□□□ -1.1
SUDS3-201ENST00000360286 DPEP1P16444 411 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 CHRNA5P30532 468 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 ST5P78524 1137 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 NEXNQ0ZGT2 675 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 ANKRD36CQ5JPF3 1778 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 CCDC191Q8NCU4 936 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 LINS1Q8NG48 757 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 BRIP1Q9BX63 1249 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 NYXQ9GZU5 481 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
SUDS3-201ENST00000360286 NRXN2Q9P2S2 1712 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 WWC3Q9ULE0 1092 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 CD2APQ9Y5K6 639 aa8.16□□□□□ -1.1
SUDS3-201ENST00000360286 C10orf71Q711Q0 1435 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 H7C1W4 665 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 PLIN1O60240 522 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 KCNA3P22001 575 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 TGFB2P61812 414 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 GCKRQ14397 625 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 SLC10A5Q5PT55 438 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 C3orf67Q6ZVT6 689 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 C2CD5Q86YS7 1000 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 ZBTB38Q8NAP3 1195 aaPredicted RBP8.15□□□□□ -1.1
SUDS3-201ENST00000360286 ARHGAP45Q92619 1136 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 CLUAP1Q96AJ1 413 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.1
SUDS3-201ENST00000360286 SRCIN1Q9C0H9 1055 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
SUDS3-201ENST00000360286 ANKRD31Q8N7Z5 1873 aa8.15□□□□□ -1.11
SUDS3-201ENST00000360286 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.11
SUDS3-201ENST00000360286 ABCC12Q96J65 1359 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 SH3TC1Q8TE82 1336 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 IRS4O14654 1257 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-201ENST00000360286 IPO8O15397 1037 aaKnown RBP8.14□□□□□ -1.11
SUDS3-201ENST00000360286 PCCAP05165 728 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-201ENST00000360286 TRIM27P14373 513 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 PDE6BP35913 854 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 ZKSCAN2Q63HK3 967 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 ATF7IPQ6VMQ6 1270 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
SUDS3-201ENST00000360286 IBTKQ9P2D0 1353 aaPredicted RBP8.13□□□□□ -1.11
SUDS3-201ENST00000360286 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 KLRG2A4D1S0 409 aaPredicted RBP8.13□□□□□ -1.11
SUDS3-201ENST00000360286 H0YIN7 160 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 ALDH1L1O75891 902 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 CASP7P55210 303 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 ZNF622Q969S3 477 aaKnown RBP eCLIP8.13□□□□□ -1.11
SUDS3-201ENST00000360286 NLRP3Q96P20 1036 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 PXDNLA1KZ92 1463 aa8.13□□□□□ -1.11
SUDS3-201ENST00000360286 KIAA1551Q9HCM1 1747 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 ABCC4O15439 1325 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 RNF123Q5XPI4 1314 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 PDE8AO60658 829 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 NBPF7P0C2Y1 421 aaPredicted RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 SRGNP10124 158 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 RLBP1P12271 317 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 CCT4P50991 539 aaKnown RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 INTS3Q68E01 1043 aaKnown RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 UBE3BQ7Z3V4 1068 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 DZIP1LQ8IYY4 767 aaKnown RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 CCDC85AQ96PX6 553 aaPredicted RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 USP44Q9H0E7 712 aa8.12□□□□□ -1.11
SUDS3-201ENST00000360286 C9orf78Q9NZ63 289 aaPredicted RBP8.12□□□□□ -1.11
SUDS3-201ENST00000360286 TAF1P21675 1872 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 CDHR2Q9BYE9 1310 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 GRM8O00222 908 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 SF3B3Q15393 1217 aaKnown RBP8.11□□□□□ -1.11
SUDS3-201ENST00000360286 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 EPHA10Q5JZY3 1008 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 C20orf194Q5TEA3 1177 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 PANK1Q8TE04 598 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 MASTLQ96GX5 879 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 SUCLG2Q96I99 432 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 PIM2Q9P1W9 311 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 ZNF219Q9P2Y4 722 aaPredicted RBP8.11□□□□□ -1.11
SUDS3-201ENST00000360286 BCS1LQ9Y276 419 aa8.11□□□□□ -1.11
SUDS3-201ENST00000360286 DDX60Q8IY21 1712 aaKnown RBP8.11□□□□□ -1.11
SUDS3-201ENST00000360286 TNRC6CQ9HCJ0 1690 aaKnown RBP8.11□□□□□ -1.11
SUDS3-201ENST00000360286 LAMB2P55268 1798 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 NPR1P16066 1061 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
SUDS3-201ENST00000360286 FOXO4P98177 505 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 SLC51AQ86UW1 340 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 FTSJ3Q8IY81 847 aaKnown RBP8.1□□□□□ -1.11
SUDS3-201ENST00000360286 TTLL6Q8N841 843 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 TTLL11Q8NHH1 800 aa8.1□□□□□ -1.11
SUDS3-201ENST00000360286 RPGRQ92834 1020 aaKnown RBP8.1□□□□□ -1.11
SUDS3-201ENST00000360286 RBM17Q96I25 401 aaKnown RBP8.1□□□□□ -1.11
SUDS3-201ENST00000360286 KAZALD1Q96I82 304 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms