RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SYT1P21579 422 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 HSPA4P34932 840 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 C16orf45Q96MC5 204 aaPredicted RBP17.74■□□□□ 0.43
UBAP1-202ENST00000359544 NAP1L2Q9ULW6 460 aaPredicted RBP17.74■□□□□ 0.43
UBAP1-202ENST00000359544 SPATA31A5Q5VU36 1347 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 SPATA31A7Q8IWB4 1347 aa17.74■□□□□ 0.43
UBAP1-202ENST00000359544 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.73■□□□□ 0.43
UBAP1-202ENST00000359544 CREBRFQ8IUR6 639 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 RILPL2Q969X0 211 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 EMILIN1Q9Y6C2 1016 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
UBAP1-202ENST00000359544 RGPD5Q99666 1765 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 IL13P35225 146 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 TPRNQ4KMQ1 711 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 IPO4Q8TEX9 1081 aaKnown RBP17.73■□□□□ 0.43
UBAP1-202ENST00000359544 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 NWD2Q9ULI1 1742 aa17.73■□□□□ 0.43
UBAP1-202ENST00000359544 ZNF397Q8NF99 534 aaPredicted RBP17.72■□□□□ 0.43
UBAP1-202ENST00000359544 TIGD1Q96MW7 591 aa17.72■□□□□ 0.43
UBAP1-202ENST00000359544 CDK12Q9NYV4 1490 aaPredicted RBP17.72■□□□□ 0.43
UBAP1-202ENST00000359544 SPATA31A1Q5TZJ5 1347 aa17.72■□□□□ 0.43
UBAP1-202ENST00000359544 AMPHP49418 695 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 CCDC186Q7Z3E2 898 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 COL18A1P39060 1754 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 MAP2P11137 1827 aaKnown RBP17.71■□□□□ 0.43
UBAP1-202ENST00000359544 AEBP1Q8IUX7 1158 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 DRC7Q8IY82 874 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 CALCOCO1Q9P1Z2 691 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 LIMCH1Q9UPQ0 1083 aa17.71■□□□□ 0.43
UBAP1-202ENST00000359544 AOX1Q06278 1338 aa17.71■□□□□ 0.42
UBAP1-202ENST00000359544 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.42
UBAP1-202ENST00000359544 LTN1O94822 1766 aa17.7■□□□□ 0.42
UBAP1-202ENST00000359544 KCNJ4P48050 445 aa17.7■□□□□ 0.42
UBAP1-202ENST00000359544 SLC20A2Q08357 652 aa17.7■□□□□ 0.42
UBAP1-202ENST00000359544 MAP3K11Q16584 847 aa17.7■□□□□ 0.42
UBAP1-202ENST00000359544 STAP2Q9UGK3 403 aa17.7■□□□□ 0.42
UBAP1-202ENST00000359544 CCT4P50991 539 aaKnown RBP17.7■□□□□ 0.42
UBAP1-202ENST00000359544 SOCS7O14512 581 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 TPD52L1Q16890 204 aaPredicted RBP17.69■□□□□ 0.42
UBAP1-202ENST00000359544 HSP90AB2PQ58FF8 381 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 TSHZ3Q63HK5 1081 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 HOXC9P31274 260 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
UBAP1-202ENST00000359544 ZSCAN25Q6NSZ9 544 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 TTC14Q96N46 770 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
UBAP1-202ENST00000359544 USP54Q70EL1 1684 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 GNAI2P04899 355 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 TYRO3Q06418 890 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
UBAP1-202ENST00000359544 DNAJC2Q99543 621 aaKnown RBP17.68■□□□□ 0.42
UBAP1-202ENST00000359544 NUP62CLQ9H1M0 184 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 CEP135Q66GS9 1140 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 EXOC6BQ9Y2D4 811 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 MRVI1Q9Y6F6 885 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 CCDC171Q6TFL3 1326 aa17.68■□□□□ 0.42
UBAP1-202ENST00000359544 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
UBAP1-202ENST00000359544 IP6K1Q92551 441 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 ZNF75DP51815 510 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 AK2P54819 239 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 LRMPQ12912 555 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 PLA2G4DQ86XP0 818 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 FAM53CQ9NYF3 392 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 RAD50Q92878 1312 aa17.67■□□□□ 0.42
UBAP1-202ENST00000359544 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
UBAP1-202ENST00000359544 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 USHBP1Q8N6Y0 703 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 TRIM5Q9C035 493 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 ERBB3P21860 1342 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 DCTN1Q14203 1278 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 LUZP1Q86V48 1076 aa17.66■□□□□ 0.42
UBAP1-202ENST00000359544 CHL1O00533 1208 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 MTMR6Q9Y217 621 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 SNX14Q9Y5W7 946 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 CRB1P82279 1406 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 NEMFO60524 1076 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 RNF20Q5VTR2 975 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 RUFY3Q7L099 469 aa17.65■□□□□ 0.42
UBAP1-202ENST00000359544 ZBTB22O15209 634 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 CDC25BP30305 580 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 NAA30Q147X3 362 aaPredicted RBP17.64■□□□□ 0.41
UBAP1-202ENST00000359544 TDRD7Q8NHU6 1098 aaKnown RBP17.64■□□□□ 0.41
UBAP1-202ENST00000359544 TSPYL1Q9H0U9 437 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 CBX8Q9HC52 389 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 ELP1O95163 1332 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 ONECUT3O60422 494 aaPredicted RBP17.64■□□□□ 0.41
UBAP1-202ENST00000359544 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 GJB2P29033 226 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 KMT5BQ4FZB7 885 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 ERO1AQ96HE7 468 aa17.64■□□□□ 0.41
UBAP1-202ENST00000359544 ZSCAN31Q96LW9 406 aaPredicted RBP17.64■□□□□ 0.41
UBAP1-202ENST00000359544 KRT85P78386 507 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms