RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 AMOTQ4VCS5 1084 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 DALRD3Q5D0E6 543 aaKnown RBP8.69□□□□□ -1.02
CCDC196-201ENST00000359454 CCDC102AQ96A19 550 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 KLRG1Q96E93 195 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 CDCA7LQ96GN5 454 aa8.69□□□□□ -1.02
CCDC196-201ENST00000359454 RBM27Q9P2N5 1060 aaKnown RBP8.69□□□□□ -1.02
CCDC196-201ENST00000359454 COL5A3P25940 1745 aaPredicted RBP8.68□□□□□ -1.02
CCDC196-201ENST00000359454 WDR90Q96KV7 1748 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 ARHGAP33O14559 1287 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 ZNF530Q6P9A1 599 aaPredicted RBP8.68□□□□□ -1.02
CCDC196-201ENST00000359454 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 JMYQ8N9B5 988 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 RNF181Q9P0P0 153 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 ARFGEF1Q9Y6D6 1849 aa8.68□□□□□ -1.02
CCDC196-201ENST00000359454 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
CCDC196-201ENST00000359454 KDM6AO15550 1401 aaPredicted RBP8.67□□□□□ -1.02
CCDC196-201ENST00000359454 PBX2P40425 430 aa8.67□□□□□ -1.02
CCDC196-201ENST00000359454 TNNT2P45379 298 aaPredicted RBP8.67□□□□□ -1.02
CCDC196-201ENST00000359454 CRKLP46109 303 aaKnown RBP8.67□□□□□ -1.02
CCDC196-201ENST00000359454 PSEN2P49810 448 aa8.67□□□□□ -1.02
CCDC196-201ENST00000359454 MTHFSP49914 203 aa8.67□□□□□ -1.02
CCDC196-201ENST00000359454 USP42Q9H9J4 1324 aaKnown RBP8.67□□□□□ -1.02
CCDC196-201ENST00000359454 GOLGB1Q14789 3259 aaKnown RBP8.66□□□□□ -1.02
CCDC196-201ENST00000359454 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 KCPQ6ZWJ8 1503 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 POTEB3A0JP26 581 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 TRIM66O15016 1216 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 PTCD1O75127 700 aaKnown RBP8.66□□□□□ -1.02
CCDC196-201ENST00000359454 DDR1Q08345 913 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 C1orf141Q5JVX7 400 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 POTEBQ6S5H4 581 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 SMC1BQ8NDV3 1235 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 RRAGCQ9HB90 399 aa8.66□□□□□ -1.02
CCDC196-201ENST00000359454 SRP68Q9UHB9 627 aaKnown RBP8.66□□□□□ -1.02
CCDC196-201ENST00000359454 ZC3H4Q9UPT8 1303 aaKnown RBP8.65□□□□□ -1.02
CCDC196-201ENST00000359454 TM4SF1P30408 202 aa8.65□□□□□ -1.02
CCDC196-201ENST00000359454 CHRNA5P30532 468 aa8.65□□□□□ -1.02
CCDC196-201ENST00000359454 HTRA3P83110 453 aa8.65□□□□□ -1.02
CCDC196-201ENST00000359454 COL13A1Q5TAT6 717 aaPredicted RBP8.65□□□□□ -1.02
CCDC196-201ENST00000359454 POTEEQ6S8J3 1075 aa8.65□□□□□ -1.02
CCDC196-201ENST00000359454 NFATC2IPQ8NCF5 419 aa8.65□□□□□ -1.02
CCDC196-201ENST00000359454 MYH14Q7Z406 1995 aaKnown RBP8.64□□□□□ -1.03
CCDC196-201ENST00000359454 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 POLRMTO00411 1230 aaKnown RBP8.64□□□□□ -1.03
CCDC196-201ENST00000359454 ZPR1O75312 459 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 PROX2Q3B8N5 592 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 INTS5Q6P9B9 1019 aaKnown RBP8.64□□□□□ -1.03
CCDC196-201ENST00000359454 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 ZBED2Q9BTP6 218 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 TIMELESSQ9UNS1 1208 aa8.64□□□□□ -1.03
CCDC196-201ENST00000359454 TNRC6CQ9HCJ0 1690 aaKnown RBP8.64□□□□□ -1.03
CCDC196-201ENST00000359454 TJP1Q07157 1748 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 FAM161AQ3B820 660 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 DMRTA1Q5VZB9 504 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 USPL1Q5W0Q7 1092 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 TSKSQ9UJT2 592 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 ADGRG1Q9Y653 693 aa8.63□□□□□ -1.03
CCDC196-201ENST00000359454 SOS1Q07889 1333 aaPredicted RBP8.62□□□□□ -1.03
CCDC196-201ENST00000359454 GLTPD2A6NH11 291 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 OATP04181 439 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 VEGFAP15692 232 aaPredicted RBP8.62□□□□□ -1.03
CCDC196-201ENST00000359454 LMNB1P20700 586 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
CCDC196-201ENST00000359454 PDE4DQ08499 809 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 SULT6B1Q6IMI4 303 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 MORC1Q86VD1 984 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 PACS2Q86VP3 889 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 TNS4Q8IZW8 715 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 PCGF6Q9BYE7 350 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 NARFQ9UHQ1 456 aa8.62□□□□□ -1.03
CCDC196-201ENST00000359454 NBPF26B4DH59 902 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 CYP19A1P11511 503 aaPredicted RBP8.61□□□□□ -1.03
CCDC196-201ENST00000359454 PRELPP51888 382 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 RASSF7Q02833 373 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 NFIXQ14938 502 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 TTLL6Q8N841 843 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 PANK3Q9H999 370 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 ADAMTS7Q9UKP4 1686 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 SBF1O95248 1867 aa8.61□□□□□ -1.03
CCDC196-201ENST00000359454 H0YIN7 160 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 SERPINB2P05120 415 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 CENPBP07199 599 aaPredicted RBP8.6□□□□□ -1.03
CCDC196-201ENST00000359454 IL13P35225 146 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 AMHR2Q16671 573 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
CCDC196-201ENST00000359454 C2CD5Q86YS7 1000 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 SLC4A5Q9BY07 1137 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 COL15A1P39059 1388 aa8.6□□□□□ -1.03
CCDC196-201ENST00000359454 SCN11AQ9UI33 1791 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 HSPA1AP0DMV8 641 aaKnown RBP8.59□□□□□ -1.03
CCDC196-201ENST00000359454 HSPA1BP0DMV9 641 aaKnown RBP8.59□□□□□ -1.03
CCDC196-201ENST00000359454 NUDT18Q6ZVK8 323 aa8.59□□□□□ -1.03
CCDC196-201ENST00000359454 PXYLP1Q8TE99 480 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms