RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 LMOD2Q6P5Q4 547 aa17.02■□□□□ 0.32
APP-205ENST00000358918 TTC6Q86TZ1 520 aa17.02■□□□□ 0.32
APP-205ENST00000358918 CCDC171Q6TFL3 1326 aa17.02■□□□□ 0.32
APP-205ENST00000358918 VPS53Q5VIR6 699 aa17.02■□□□□ 0.31
APP-205ENST00000358918 CNTROBQ8N137 903 aa17.02■□□□□ 0.31
APP-205ENST00000358918 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.31
APP-205ENST00000358918 GOLGA6L4A6NEF3 574 aa17.01■□□□□ 0.31
APP-205ENST00000358918 CPA1P15085 419 aa17.01■□□□□ 0.31
APP-205ENST00000358918 KCNJ4P48050 445 aa17.01■□□□□ 0.31
APP-205ENST00000358918 DDX19AQ9NUU7 478 aaKnown RBP17.01■□□□□ 0.31
APP-205ENST00000358918 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
APP-205ENST00000358918 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
APP-205ENST00000358918 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
APP-205ENST00000358918 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
APP-205ENST00000358918 PDE4CQ08493 712 aa17.01■□□□□ 0.31
APP-205ENST00000358918 KMT5BQ4FZB7 885 aa17.01■□□□□ 0.31
APP-205ENST00000358918 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
APP-205ENST00000358918 IP6K1Q92551 441 aa17.01■□□□□ 0.31
APP-205ENST00000358918 TIGD1Q96MW7 591 aa17.01■□□□□ 0.31
APP-205ENST00000358918 RAB11FIP3O75154 756 aa17■□□□□ 0.31
APP-205ENST00000358918 CDC25BP30305 580 aa17■□□□□ 0.31
APP-205ENST00000358918 DACT1Q9NYF0 836 aa17■□□□□ 0.31
APP-205ENST00000358918 PI4K2BQ8TCG2 481 aa17■□□□□ 0.31
APP-205ENST00000358918 JAKMIP1Q96N16 626 aaKnown RBP17■□□□□ 0.31
APP-205ENST00000358918 LTN1O94822 1766 aa16.99■□□□□ 0.31
APP-205ENST00000358918 FAM193AP78312 1265 aa16.99■□□□□ 0.31
APP-205ENST00000358918 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
APP-205ENST00000358918 KCNH5Q8NCM2 988 aa16.99■□□□□ 0.31
APP-205ENST00000358918 CLSTN2Q9H4D0 955 aa16.99■□□□□ 0.31
APP-205ENST00000358918 ZNF215Q9UL58 517 aaPredicted RBP16.99■□□□□ 0.31
APP-205ENST00000358918 CYP46A1Q9Y6A2 500 aa16.99■□□□□ 0.31
APP-205ENST00000358918 NFAT5O94916 1531 aa16.99■□□□□ 0.31
APP-205ENST00000358918 GNAT3A8MTJ3 354 aa16.99■□□□□ 0.31
APP-205ENST00000358918 ZBTB22O15209 634 aa16.99■□□□□ 0.31
APP-205ENST00000358918 NEMFO60524 1076 aa16.99■□□□□ 0.31
APP-205ENST00000358918 IRX5P78411 483 aaPredicted RBP16.99■□□□□ 0.31
APP-205ENST00000358918 FLIIQ13045 1269 aa16.99■□□□□ 0.31
APP-205ENST00000358918 PTPN14Q15678 1187 aa16.99■□□□□ 0.31
APP-205ENST00000358918 CWC27Q6UX04 472 aaKnown RBP16.99■□□□□ 0.31
APP-205ENST00000358918 ERO1AQ96HE7 468 aa16.99■□□□□ 0.31
APP-205ENST00000358918 SPG7Q9UQ90 795 aa16.99■□□□□ 0.31
APP-205ENST00000358918 DTNBO60941 627 aa16.98■□□□□ 0.31
APP-205ENST00000358918 ZNF165P49910 485 aa16.98■□□□□ 0.31
APP-205ENST00000358918 CREBRFQ8IUR6 639 aa16.98■□□□□ 0.31
APP-205ENST00000358918 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
APP-205ENST00000358918 FAM53CQ9NYF3 392 aa16.98■□□□□ 0.31
APP-205ENST00000358918 CALCOCO1Q9P1Z2 691 aa16.98■□□□□ 0.31
APP-205ENST00000358918 PDCP20941 246 aa16.97■□□□□ 0.31
APP-205ENST00000358918 CCDC144BQ3MJ40 725 aa16.97■□□□□ 0.31
APP-205ENST00000358918 SLFNL1Q499Z3 407 aa16.97■□□□□ 0.31
APP-205ENST00000358918 NBPF6Q5VWK0 638 aa16.97■□□□□ 0.31
APP-205ENST00000358918 RBM43Q6ZSC3 357 aaKnown RBP16.97■□□□□ 0.31
APP-205ENST00000358918 CCDC144CPQ8IYA2 1237 aa16.97■□□□□ 0.31
APP-205ENST00000358918 NBPF4Q96M43 638 aa16.97■□□□□ 0.31
APP-205ENST00000358918 TM6SF1Q9BZW5 370 aa16.97■□□□□ 0.31
APP-205ENST00000358918 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
APP-205ENST00000358918 GCP02774 474 aa16.97■□□□□ 0.31
APP-205ENST00000358918 UBTFL1P0CB47 393 aaPredicted RBP16.97■□□□□ 0.31
APP-205ENST00000358918 FERMT3Q86UX7 667 aa16.97■□□□□ 0.31
APP-205ENST00000358918 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
APP-205ENST00000358918 BCL11BQ9C0K0 894 aaPredicted RBP16.97■□□□□ 0.31
APP-205ENST00000358918 ZSWIM6Q9HCJ5 1215 aa16.97■□□□□ 0.31
APP-205ENST00000358918 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
APP-205ENST00000358918 CAVIN2O95810 425 aa16.96■□□□□ 0.31
APP-205ENST00000358918 ST3GAL1Q11201 340 aa16.96■□□□□ 0.31
APP-205ENST00000358918 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
APP-205ENST00000358918 LRRC8AQ8IWT6 810 aa16.96■□□□□ 0.31
APP-205ENST00000358918 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
APP-205ENST00000358918 SPATA32Q96LK8 384 aa16.96■□□□□ 0.31
APP-205ENST00000358918 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
APP-205ENST00000358918 HTATSF1O43719 755 aaKnown RBP16.96■□□□□ 0.31
APP-205ENST00000358918 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
APP-205ENST00000358918 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
APP-205ENST00000358918 ME3Q16798 604 aa16.96■□□□□ 0.31
APP-205ENST00000358918 FBXO38Q6PIJ6 1188 aa16.96■□□□□ 0.31
APP-205ENST00000358918 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
APP-205ENST00000358918 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
APP-205ENST00000358918 IL17REQ8NFR9 667 aa16.96■□□□□ 0.31
APP-205ENST00000358918 DNAJC25Q9H1X3 360 aa16.96■□□□□ 0.31
APP-205ENST00000358918 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.96■□□□□ 0.31
APP-205ENST00000358918 V9GYY5 206 aaPredicted RBP16.96■□□□□ 0.31
APP-205ENST00000358918 GOLGA6L19H0YKK7 550 aa16.95■□□□□ 0.3
APP-205ENST00000358918 ELF2Q15723 593 aa16.95■□□□□ 0.3
APP-205ENST00000358918 RNF20Q5VTR2 975 aa16.95■□□□□ 0.3
APP-205ENST00000358918 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
APP-205ENST00000358918 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
APP-205ENST00000358918 RHPN1Q8TCX5 695 aa16.95■□□□□ 0.3
APP-205ENST00000358918 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
APP-205ENST00000358918 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
APP-205ENST00000358918 ERICH4A6NGS2 130 aa16.95■□□□□ 0.3
APP-205ENST00000358918 HSPA2P54652 639 aa16.95■□□□□ 0.3
APP-205ENST00000358918 ADCK5Q3MIX3 580 aa16.95■□□□□ 0.3
APP-205ENST00000358918 NYAP1Q6ZVC0 841 aa16.95■□□□□ 0.3
APP-205ENST00000358918 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
APP-205ENST00000358918 FAM173BQ6P4H8 233 aa16.94■□□□□ 0.3
APP-205ENST00000358918 KIF1BPQ96EK5 621 aa16.94■□□□□ 0.3
APP-205ENST00000358918 USP27XA6NNY8 438 aa16.94■□□□□ 0.3
APP-205ENST00000358918 SLU7O95391 586 aaKnown RBP16.94■□□□□ 0.3
APP-205ENST00000358918 SARM1Q6SZW1 724 aa16.94■□□□□ 0.3
APP-205ENST00000358918 BICD2Q8TD16 824 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms