RNA–Protein interactions for RNA: ENST00000358545.6

TNFSF11-202, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-202ENST00000358545 AP1G2O75843 785 aa9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 FSTL1Q12841 308 aa9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 RTL5Q5HYW3 569 aaPredicted RBP9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 PXDNLA1KZ92 1463 aa9.08□□□□□ -0.96
TNFSF11-202ENST00000358545 TTC21AQ8NDW8 1320 aa9.07□□□□□ -0.96
TNFSF11-202ENST00000358545 FAM205CA6NFA0 338 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 AMIGO3Q86WK7 504 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 FLAD1Q8NFF5 587 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 STAC3Q96MF2 364 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 PLEKHG2Q9H7P9 1386 aa9.06□□□□□ -0.96
TNFSF11-202ENST00000358545 ARHGAP33O14559 1287 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 ABL2P42684 1182 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 USP46P62068 366 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 NBPF1Q3BBV0 1214 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 KTN1Q86UP2 1357 aaKnown RBP9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 GCGRP47871 477 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 ARHGAP27Q6ZUM4 889 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 PCDH10Q9P2E7 1040 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 MEGF6O75095 1541 aa9.05□□□□□ -0.96
TNFSF11-202ENST00000358545 C10orf71Q711Q0 1435 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 MAP2P11137 1827 aaKnown RBP9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 CCDC88AQ3V6T2 1871 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 POTEB3A0JP26 581 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 LCE2DQ5TA82 110 aaPredicted RBP9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 POTEBQ6S5H4 581 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 ZBTB3Q9H5J0 574 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 SEPT9Q9UHD8 586 aaPredicted RBP9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 TBC1D2BQ9UPU7 963 aa9.04□□□□□ -0.96
TNFSF11-202ENST00000358545 PALLDQ8WX93 1383 aa9.03□□□□□ -0.96
TNFSF11-202ENST00000358545 HOXA2O43364 376 aa9.03□□□□□ -0.96
TNFSF11-202ENST00000358545 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
TNFSF11-202ENST00000358545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.03□□□□□ -0.96
TNFSF11-202ENST00000358545 RRAGCQ9HB90 399 aa9.03□□□□□ -0.96
TNFSF11-202ENST00000358545 USP31Q70CQ4 1352 aa9.02□□□□□ -0.96
TNFSF11-202ENST00000358545 FDX1P10109 184 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 NME9Q86XW9 330 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 SMC1BQ8NDV3 1235 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 FAM163AQ96GL9 167 aaPredicted RBP9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 CALR3Q96L12 384 aaKnown RBP9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 EVC2Q86UK5 1308 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 C4AP0C0L4 1744 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.97
TNFSF11-202ENST00000358545 NSD3Q9BZ95 1437 aa9.01□□□□□ -0.97
TNFSF11-202ENST00000358545 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
TNFSF11-202ENST00000358545 ZNF687Q8N1G0 1237 aa9.01□□□□□ -0.97
TNFSF11-202ENST00000358545 ZCRB1Q8TBF4 217 aaKnown RBP9.01□□□□□ -0.97
TNFSF11-202ENST00000358545 RABGEF1Q9UJ41 708 aa9.01□□□□□ -0.97
TNFSF11-202ENST00000358545 SLC10A3P09131 477 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 PBX2P40425 430 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 SWT1Q5T5J6 900 aaKnown RBP9□□□□□ -0.97
TNFSF11-202ENST00000358545 SLC4A5Q9BY07 1137 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 RAB3GAP2Q9H2M9 1393 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 MMP10P09238 476 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 RNF181Q9P0P0 153 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 PCDHGC3Q9UN70 934 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 VPS9D1Q9Y2B5 631 aa9□□□□□ -0.97
TNFSF11-202ENST00000358545 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 DPEP1P16444 411 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 SSFA2P28290 1259 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 NECTIN2Q92692 538 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 GLMNQ92990 594 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 NDUFB9Q9Y6M9 179 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 SBNO2Q9Y2G9 1366 aa8.99□□□□□ -0.97
TNFSF11-202ENST00000358545 CD163L1Q9NR16 1453 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 TGFB2P61812 414 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 GUCA2AQ02747 115 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 CTDSPL2Q05D32 466 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 IP6K1Q92551 441 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 TRAIPQ9BWF2 469 aa8.98□□□□□ -0.97
TNFSF11-202ENST00000358545 PDE4DIPQ5VU43 2346 aa8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 VIRMAQ69YN4 1812 aaKnown RBP8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 FOXN1O15353 648 aa8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 MTMR2Q13614 643 aa8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 LINC00116Q8NCU8 138 aa8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 HLA-CQ95604 372 aa8.97□□□□□ -0.97
TNFSF11-202ENST00000358545 SLC4A3P48751 1232 aa8.96□□□□□ -0.97
TNFSF11-202ENST00000358545 USHBP1Q8N6Y0 703 aa8.96□□□□□ -0.97
TNFSF11-202ENST00000358545 MKRN1Q9UHC7 482 aaKnown RBP8.96□□□□□ -0.97
TNFSF11-202ENST00000358545 COL5A3P25940 1745 aaPredicted RBP8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 HELBQ8NG08 1087 aaPredicted RBP8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 PRDM10Q9NQV6 1147 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 PCDH11XQ9BZA7 1347 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 PCDH11YQ9BZA8 1340 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 HOXC9P31274 260 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 TSC1Q92574 1164 aa8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 SMARCC1Q92922 1105 aaPredicted RBP8.95□□□□□ -0.98
TNFSF11-202ENST00000358545 DCAF5Q96JK2 942 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms