RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GOLGA6CA6NDK9 693 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 GOLGA6DP0CG33 693 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 GOLGA6AQ9NYA3 693 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 DACT1Q9NYF0 836 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 RAB11FIP3O75154 756 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 CLSTN2Q9H4D0 955 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 PARD3Q8TEW0 1356 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 LIG3P49916 1009 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 UBE4AQ14139 1066 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 MIPOL1Q8TD10 442 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 TRIM4Q9C037 500 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 FBXO3Q9UK99 471 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 EXOC6BQ9Y2D4 811 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 HEATR1Q9H583 2144 aaKnown RBP6.96□□□□□ -1.3
VPS13B-203ENST00000358544 IL1RAPL2Q9NP60 686 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 IFNKQ9P0W0 207 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 ZNF215Q9UL58 517 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-203ENST00000358544 NPHP3Q7Z494 1330 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 BRD3Q15059 726 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 C6orf163Q5TEZ5 329 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 TMX4Q9H1E5 349 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-203ENST00000358544 ELP1O95163 1332 aa6.96□□□□□ -1.3
VPS13B-203ENST00000358544 TACC1O75410 805 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 VAV2P52735 878 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 ZNF569Q5MCW4 686 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 CCDC102BQ68D86 513 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 U3KPZ7 1027 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-203ENST00000358544 N4BP3O15049 544 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 FAM184BQ9ULE4 1060 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 VGFO15240 615 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-203ENST00000358544 TEFQ10587 303 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 GOPCQ9HD26 462 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 E2F4Q16254 413 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 C8orf76Q96K31 380 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 PUF60Q9UHX1 559 aaKnown RBP6.95□□□□□ -1.3
VPS13B-203ENST00000358544 NCAPD3P42695 1498 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 CCDC196A0A1B0GTZ2 297 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 WDHD1O75717 1129 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-203ENST00000358544 ZBTB9Q96C00 473 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 RTTNQ86VV8 2226 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 GOLGA8BA8MQT2 603 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 ANTXR1Q9H6X2 564 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 CBX8Q9HC52 389 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 TBC1D2BQ9UPU7 963 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 ZEB2O60315 1214 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 TEX2Q8IWB9 1127 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 FAM160A1Q05DH4 1040 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 A6NNZ2 444 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 MYO1CO00159 1063 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 TUBB8Q3ZCM7 444 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 IFT74Q96LB3 600 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 RASAL2Q9UJF2 1139 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 EHBP1L1Q8N3D4 1523 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 ANKRD62A6NC57 917 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 CCDC172P0C7W6 258 aa6.95□□□□□ -1.3
VPS13B-203ENST00000358544 THUMPD2Q9BTF0 503 aaKnown RBP6.95□□□□□ -1.3
VPS13B-203ENST00000358544 FKBP15Q5T1M5 1219 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 VPS36Q86VN1 386 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 RIPOR2Q9Y4F9 1068 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 SPATS2LQ9NUQ6 558 aaKnown RBP6.94□□□□□ -1.3
VPS13B-203ENST00000358544 HMG20BQ9P0W2 317 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 CAPN7Q9Y6W3 813 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 WHAMMP3Q1A5X7 153 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 VEZTQ9HBM0 779 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 CACNA1EQ15878 2313 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 GLRX3O76003 335 aaKnown RBP6.94□□□□□ -1.3
VPS13B-203ENST00000358544 KRT18P05783 430 aaKnown RBP6.94□□□□□ -1.3
VPS13B-203ENST00000358544 CABS1Q96KC9 395 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 CARD6Q9BX69 1037 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 JADE2Q9NQC1 790 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 GTF2E1P29083 439 aaPredicted RBP6.94□□□□□ -1.3
VPS13B-203ENST00000358544 SLC8A1P32418 973 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 GBP1P32455 592 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 ERCC6LQ2NKX8 1250 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 TSHZ3Q63HK5 1081 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 GBP5Q96PP8 586 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 CCDC178Q5BJE1 867 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 ZFYVE27Q5T4F4 411 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 PCK1P35558 622 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 SYKP43405 635 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 SNCBQ16143 134 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 TTC5Q8N0Z6 440 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 FRMD3A2A2Y4 597 aa6.94□□□□□ -1.3
VPS13B-203ENST00000358544 NGDNQ8NEJ9 315 aaKnown RBP6.94□□□□□ -1.3
VPS13B-203ENST00000358544 PPFIA1Q13136 1202 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 ESYT1Q9BSJ8 1104 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 MED4Q9NPJ6 270 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.93□□□□□ -1.37e-7■■■■■ 168.7
VPS13B-203ENST00000358544 SPG7Q9UQ90 795 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 NAPGQ99747 312 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-203ENST00000358544 RABEP2Q9H5N1 569 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 PDE11AQ9HCR9 933 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 IL16Q14005 1332 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 ZMYM3Q14202 1370 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 RLBP1P12271 317 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 CCDC57Q2TAC2 916 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 SELENOSQ9BQE4 189 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 TERF2Q15554 542 aa6.93□□□□□ -1.3
VPS13B-203ENST00000358544 RNF168Q8IYW5 571 aaPredicted RBP6.93□□□□□ -1.3
VPS13B-203ENST00000358544 GPR161Q8N6U8 529 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms