RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 EXOC5O00471 708 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 CHL1O00533 1208 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
SLC6A20-202ENST00000358525 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 CABLES1Q8TDN4 633 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 TTC41PQ6P2S7 1318 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 TEX13AQ9BXU3 409 aaPredicted RBP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 ZHX3Q9H4I2 956 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 PLXNC1O60486 1568 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 SFPQP23246 707 aaKnown RBP eCLIP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 AK2P54819 239 aa17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 ORC3Q9UBD5 711 aaPredicted RBP17.05■□□□□ 0.32
SLC6A20-202ENST00000358525 GCP02774 474 aa17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 BIN1O00499 593 aa17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 TTF1Q15361 905 aaPredicted RBP17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 USP5P45974 858 aa17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 MICU3Q86XE3 530 aa17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 IP6K1Q92551 441 aa17.04■□□□□ 0.32
SLC6A20-202ENST00000358525 TANGO6Q9C0B7 1094 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 RNMTO43148 476 aaKnown RBP17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 F13A1P00488 732 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 MCMDC2Q4G0Z9 681 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 NCOA7Q8NI08 942 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 SBNO1A3KN83 1393 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 DNM1Q05193 864 aaKnown RBP17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 KLHL10Q6JEL2 608 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 TTC37Q6PGP7 1564 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 TMEM67Q5HYA8 995 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 ERCC4Q92889 916 aaPredicted RBP17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 RRP9O43818 475 aaKnown RBP17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 ZPR1O75312 459 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 ZNF165P49910 485 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 Q6ZUG5 572 aa17.03■□□□□ 0.32
SLC6A20-202ENST00000358525 SSBP05455 408 aaKnown RBP eCLIP17.02■□□□□ 0.32
SLC6A20-202ENST00000358525 STX1AQ16623 288 aa17.02■□□□□ 0.32
SLC6A20-202ENST00000358525 CT47A1Q5JQC4 288 aaPredicted RBP17.02■□□□□ 0.32
SLC6A20-202ENST00000358525 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.32
SLC6A20-202ENST00000358525 PRIM1P49642 420 aaKnown RBP17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 UVSSAQ2YD98 709 aa17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 DEF6Q9H4E7 631 aa17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 TBX22Q9Y458 520 aa17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.31
SLC6A20-202ENST00000358525 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 METAP2P50579 478 aaKnown RBP eCLIP17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 CNNM3Q8NE01 707 aa17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 MKNK2Q9HBH9 465 aa17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 IQCA1Q86XH1 822 aa17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 ZSCAN16Q9H4T2 348 aaPredicted RBP17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
SLC6A20-202ENST00000358525 NPHP3Q7Z494 1330 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 MCM5P33992 734 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 SYNMO15061 1565 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 PDCL2Q8N4E4 241 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
SLC6A20-202ENST00000358525 TFCP2Q12800 502 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
SLC6A20-202ENST00000358525 SBNO2Q9Y2G9 1366 aa17■□□□□ 0.31
SLC6A20-202ENST00000358525 ZSCAN29Q8IWY8 852 aaPredicted RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 TRMT1Q9NXH9 659 aaKnown RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 CPA1P15085 419 aa16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 USP19O94966 1318 aa16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 ISM2Q6H9L7 571 aa16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 TRMT2AQ8IZ69 625 aaKnown RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 PAG1Q9NWQ8 432 aa16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 EPB41L2O43491 1005 aaKnown RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 ATP2B3Q16720 1220 aa16.99■□□□□ 0.31
SLC6A20-202ENST00000358525 MFSD6Q6ZSS7 791 aa16.98■□□□□ 0.31
SLC6A20-202ENST00000358525 SLC26A6Q9BXS9 759 aa16.98■□□□□ 0.31
SLC6A20-202ENST00000358525 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
SLC6A20-202ENST00000358525 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
SLC6A20-202ENST00000358525 TNNT1P13805 278 aa16.98■□□□□ 0.31
SLC6A20-202ENST00000358525 CATIPQ7Z7H3 387 aa16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 PREX2Q70Z35 1606 aa16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 EIF5P55010 431 aaKnown RBP16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 INTS4Q96HW7 963 aaKnown RBP16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 ZFYP08048 801 aaPredicted RBP16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 ANO6Q4KMQ2 910 aa16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 ARHGAP29Q52LW3 1261 aa16.97■□□□□ 0.31
SLC6A20-202ENST00000358525 TMC6Q7Z403 805 aa16.96■□□□□ 0.31
SLC6A20-202ENST00000358525 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
SLC6A20-202ENST00000358525 UQCRFS1P1P0C7P4 283 aa16.96■□□□□ 0.31
SLC6A20-202ENST00000358525 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
SLC6A20-202ENST00000358525 RUFY3Q7L099 469 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms