RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 RUFY4Q6ZNE9 571 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 TBC1D2BQ9UPU7 963 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CAPN2P17655 700 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CHMLP26374 656 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 DRP2Q13474 957 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 IFFO1Q0D2I5 559 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 C1orf141Q5JVX7 400 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ANKRD18AQ8IVF6 992 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ELOA2Q8IYF1 753 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ALDH8A1Q9H2A2 487 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 FOXD4L1Q9NU39 408 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 BICRAQ9NZM4 1560 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 TERF2Q15554 542 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 FAM114A1Q8IWE2 563 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 HCLS1P14317 486 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 IL17RAQ96F46 866 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CALR3Q96L12 384 aaKnown RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 AMPD3Q01432 767 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ALS2CLQ60I27 953 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC9Q9Y3X0 531 aaKnown RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 FAM160A1Q05DH4 1040 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 HOOK3Q86VS8 718 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 TEFQ10587 303 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 STK38Q15208 465 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CFAP70Q5T0N1 1121 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 EFCAB13Q8IY85 973 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CTTNBP2Q8WZ74 1663 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 RBM27Q9P2N5 1060 aaKnown RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ABCC4O15439 1325 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 VAV2P52735 878 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 SEMA3EO15041 775 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 FIBPO43427 364 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 F13A1P00488 732 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 PRPHP41219 470 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ATP8B2P98198 1209 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 JAKMIP2Q96AA8 810 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 CEP89Q96ST8 783 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ARHGEF10O15013 1369 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 MAP3K5Q99683 1374 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 ATP6V1AP38606 617 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 RUFY3Q7L099 469 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 RIOK3O14730 519 aaKnown RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 VAMP4O75379 141 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 RBBP5Q15291 538 aaKnown RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 NUP58Q9BVL2 599 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 A0A1W2PQ27 194 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 A0A1W2PQ64 194 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 A0A1W2PQD8 194 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 FAM177A1Q8N128 213 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 NAP1L3Q99457 506 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 RLBP1P12271 317 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 HSPA4P34932 840 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CLSTN2Q9H4D0 955 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CNGA4Q8IV77 575 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 PRM3Q9NNZ6 103 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 NDC80O14777 642 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 DBF4Q9UBU7 674 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 LMAN1P49257 510 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 VPS36Q86VN1 386 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 PRDM2Q13029 1718 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 PSME1Q06323 249 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 TDRD7Q8NHU6 1098 aaKnown RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 FAM76AQ8TAV0 307 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 LRRC27Q9C0I9 530 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 NUCKS1Q9H1E3 243 aaKnown RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 TRAPPC8Q9Y2L5 1435 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 SYT1P21579 422 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 DHX32Q7L7V1 743 aaKnown RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 SMARCC1Q92922 1105 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CHL1O00533 1208 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 SEC24BO95487 1268 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 NF2P35240 595 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 STX10O60499 249 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 BUB1BO60566 1050 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 LRRC8AQ8IWT6 810 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 NACAP1Q9BZK3 213 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CNNM2Q9H8M5 875 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 DACT1Q9NYF0 836 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 SMC1AQ14683 1233 aaKnown RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 LMBR1Q8WVP7 490 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 BPIFA3Q9BQP9 254 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 WDR7Q9Y4E6 1490 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 PRG4Q92954 1404 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC172P0C7W6 258 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 GNG11P61952 73 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC186Q7Z3E2 898 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 TSGA10IPQ3SY00 556 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 GAS2L3Q86XJ1 694 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 GBP7Q8N8V2 638 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 STK26Q9P289 416 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 TTF2Q9UNY4 1162 aaKnown RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 A0A087WZG4 1122 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 IFT74Q96LB3 600 aa4.72□□□□□ -1.65
SYNE2-204ENST00000358025 RNF41Q9H4P4 317 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 FOXD4L5Q5VV16 416 aaPredicted RBP4.72□□□□□ -1.65
SYNE2-204ENST00000358025 CEP85Q6P2H3 762 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms