RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 PDCP20941 246 aa15.83■□□□□ 0.12
NCDN-201ENST00000356090 U2AF2P26368 475 aaKnown RBP eCLIP15.83■□□□□ 0.127e-6■■□□□ 14.4
NCDN-201ENST00000356090 PROSER3Q2NL68 480 aa15.83■□□□□ 0.12
NCDN-201ENST00000356090 EVI5LQ96CN4 794 aa15.83■□□□□ 0.12
NCDN-201ENST00000356090 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.12
NCDN-201ENST00000356090 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 FILIP1Q7Z7B0 1213 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 TLR7Q9NYK1 1049 aaKnown RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 TNRQ92752 1358 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 RIMS1Q86UR5 1692 aaKnown RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 A0A087WWV3 80 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 BECN2A8MW95 431 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 ZNF165P49910 485 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 POLA2Q14181 598 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 TMEM87AQ8NBN3 555 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 OVOS2A0A0J9YW53 1432 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 OVOS2Q6IE36 1432 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 HTATSF1O43719 755 aaKnown RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 JAK2O60674 1132 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 PDIA4P13667 645 aaKnown RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
NCDN-201ENST00000356090 ZNF710Q8N1W2 664 aa15.82■□□□□ 0.12
NCDN-201ENST00000356090 A0A0D9SFI3 127 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 GUCY1B3Q02153 619 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 KIAA1524Q8TCG1 905 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 TAF6LQ9Y6J9 622 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 SLC27A2O14975 620 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 NBPF6Q5VWK0 638 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 NBPF4Q96M43 638 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 CBX8Q9HC52 389 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 ZSWIM6Q9HCJ5 1215 aa15.81■□□□□ 0.12
NCDN-201ENST00000356090 CEP170BQ9Y4F5 1589 aaPredicted RBP15.81■□□□□ 0.12
NCDN-201ENST00000356090 TTC41PQ6P2S7 1318 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 TNNT1P13805 278 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 DBF4Q9UBU7 674 aaPredicted RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 CLIP2Q9UDT6 1046 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.8■□□□□ 0.12
NCDN-201ENST00000356090 V9GYY5 206 aaPredicted RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 ZRSR1Q15695 479 aaKnown RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 ERC1Q8IUD2 1116 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 ERCC4Q92889 916 aaPredicted RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 PSME1Q06323 249 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 ATP2B3Q16720 1220 aa15.8■□□□□ 0.12
NCDN-201ENST00000356090 BICC1Q9H694 974 aaKnown RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
NCDN-201ENST00000356090 TPM3P06753 285 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 CCDC129Q6ZRS4 1044 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 MRVI1Q9Y6F6 885 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 TMEM2Q9UHN6 1383 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 NR1I2O75469 434 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 SMAP1Q8IYB5 467 aaPredicted RBP15.79■□□□□ 0.12
NCDN-201ENST00000356090 BRF1Q92994 677 aa15.79■□□□□ 0.12
NCDN-201ENST00000356090 SCAND2PQ9GZW5 306 aaPredicted RBP15.79■□□□□ 0.12
NCDN-201ENST00000356090 FMNL2Q96PY5 1086 aa15.78■□□□□ 0.12
NCDN-201ENST00000356090 NAA30Q147X3 362 aaPredicted RBP15.78■□□□□ 0.12
NCDN-201ENST00000356090 SUCLG2Q96I99 432 aa15.78■□□□□ 0.12
NCDN-201ENST00000356090 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
NCDN-201ENST00000356090 SLC39A6Q13433 755 aa15.78■□□□□ 0.12
NCDN-201ENST00000356090 SIRT1Q96EB6 747 aa15.78■□□□□ 0.12
NCDN-201ENST00000356090 CHGBP05060 677 aa15.77■□□□□ 0.12
NCDN-201ENST00000356090 CCT2P78371 535 aaKnown RBP15.77■□□□□ 0.12
NCDN-201ENST00000356090 CCDC112Q8NEF3 446 aa15.77■□□□□ 0.12
NCDN-201ENST00000356090 NEUROD6Q96NK8 337 aa15.77■□□□□ 0.12
NCDN-201ENST00000356090 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.77■□□□□ 0.12
NCDN-201ENST00000356090 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.11
NCDN-201ENST00000356090 NECTIN1Q15223 517 aa15.77■□□□□ 0.11
NCDN-201ENST00000356090 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.11
NCDN-201ENST00000356090 ZNF589Q86UQ0 364 aaPredicted RBP15.77■□□□□ 0.11
NCDN-201ENST00000356090 ANKRD1Q15327 319 aa15.77■□□□□ 0.11
NCDN-201ENST00000356090 ZNF771Q7L3S4 317 aaPredicted RBP15.77■□□□□ 0.11
NCDN-201ENST00000356090 LEO1Q8WVC0 666 aaPredicted RBP15.77■□□□□ 0.11
NCDN-201ENST00000356090 GRM8O00222 908 aa15.76■□□□□ 0.11
NCDN-201ENST00000356090 DDX58O95786 925 aaKnown RBP15.76■□□□□ 0.11
NCDN-201ENST00000356090 PLEKHO1Q53GL0 409 aaPredicted RBP15.76■□□□□ 0.11
NCDN-201ENST00000356090 HIP1O00291 1037 aa15.76■□□□□ 0.11
NCDN-201ENST00000356090 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
NCDN-201ENST00000356090 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
NCDN-201ENST00000356090 HDAC5Q9UQL6 1122 aa15.76■□□□□ 0.11
NCDN-201ENST00000356090 SEC62Q99442 399 aaKnown RBP15.75■□□□□ 0.11
NCDN-201ENST00000356090 FUCA2Q9BTY2 467 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 KSR2Q6VAB6 950 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 CCDC73Q6ZRK6 1079 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 KDRP35968 1356 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 NPHP3Q7Z494 1330 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 KCNA6P17658 529 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 ME1P48163 572 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 Q6ZUG5 572 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 CHST3Q7LGC8 479 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 MYD88Q99836 296 aa15.75■□□□□ 0.11
NCDN-201ENST00000356090 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
NCDN-201ENST00000356090 EPB41L2O43491 1005 aaKnown RBP15.74■□□□□ 0.11
NCDN-201ENST00000356090 SASH1O94885 1247 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 RPS6KB1P23443 525 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 SPTLC3Q9NUV7 552 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms