RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 CTNNBL1Q8WYA6 563 aaPredicted RBP14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 PRXQ9BXM0 1461 aa14.57□□□□□ -0.08
SYNCRIP-201ENST00000355238 RTEL1-TNFRSF6BF6WH68 1400 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 ANKRD18BA2A2Z9 1011 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 PIBF1Q8WXW3 757 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 RNF216Q9NWF9 866 aaPredicted RBP14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 TACC1O75410 805 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 NOP2P46087 812 aaKnown RBP14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 SYT10Q6XYQ8 523 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 PAF1Q8N7H5 531 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 LRP2BPQ9P2M1 347 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 NCAPD3P42695 1498 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 KIF4AO95239 1232 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 TTC14Q96N46 770 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 NAPBQ9H115 298 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 B4GALNT4Q76KP1 1039 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 KIF5BP33176 963 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 CABP4P57796 275 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 GTF3C6Q969F1 213 aa14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 CPSF2Q9P2I0 782 aaKnown RBP14.56□□□□□ -0.08
SYNCRIP-201ENST00000355238 KRT83P78385 493 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 PLCD3Q8N3E9 789 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 SEC63Q9UGP8 760 aaKnown RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 TRIM21P19474 475 aaKnown RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 POTEDQ86YR6 584 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 SELENOOQ9BVL4 669 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 PCDHB15Q9Y5E8 787 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 RNF41Q9H4P4 317 aaPredicted RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 A6NNZ2 444 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 ZNF76P36508 570 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 TUBB8Q3ZCM7 444 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 PRPF4BQ13523 1007 aaKnown RBP14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC96Q2M329 555 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 ZNF287Q9HBT7 754 aa14.55□□□□□ -0.08
SYNCRIP-201ENST00000355238 A0A087WZG4 1122 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 FAM177BA6PVY3 158 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 DNM1Q05193 864 aaKnown RBP14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC40Q4G0X9 1142 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 DAAM2Q86T65 1068 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 SCLT1Q96NL6 688 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 ESYT1Q9BSJ8 1104 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 CEP83Q9Y592 693 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 KRT86O43790 486 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 NPHP3Q7Z494 1330 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 RAD54L2Q9Y4B4 1467 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC194A0A1B0GVG4 234 aa14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 RIOK3O14730 519 aaKnown RBP14.54□□□□□ -0.08
SYNCRIP-201ENST00000355238 TUBB2AQ13885 445 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 RRS1Q15050 365 aaKnown RBP14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 TUBB2BQ9BVA1 445 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 RASAL2Q9UJF2 1139 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 BMP15O95972 392 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC8Q9H0W5 538 aaPredicted RBP14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 HECW1Q76N89 1606 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 ZNF445P59923 1031 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 CETN1Q12798 172 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 RBSNQ9H1K0 784 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 TCP11L1Q9NUJ3 509 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 A0A1W2PRG0 241 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 U2AF2P26368 475 aaKnown RBP eCLIP14.53□□□□□ -0.085e-7■■■□□ 17.1
SYNCRIP-201ENST00000355238 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 IFIT3O14879 490 aaKnown RBP14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 EVCP57679 992 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 CALML4Q96GE6 196 aa14.53□□□□□ -0.08
SYNCRIP-201ENST00000355238 NLRP5P59047 1200 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 NAA25Q14CX7 972 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 TRIM47Q96LD4 638 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 CPLX4Q7Z7G2 160 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 PLVAPQ9BX97 442 aa14.52□□□□□ -0.08
SYNCRIP-201ENST00000355238 MCM10Q7L590 875 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 LRRC27Q9C0I9 530 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 NSD2O96028 1365 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 VAV2P52735 878 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 MEX3CQ5U5Q3 659 aaKnown RBP14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 HOMER2Q9NSB8 354 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 MYO1BO43795 1136 aa14.52□□□□□ -0.09
SYNCRIP-201ENST00000355238 F6X3S4 739 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 PHACTR2O75167 634 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 CCDC77Q9BR77 488 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 PPP2R3AQ06190 1150 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 CCDC50Q8IVM0 306 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 RTL1A6NKG5 1358 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 CCDC172P0C7W6 258 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 METTL24Q5JXM2 366 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 TROQ12816 1431 aaPredicted RBP14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 ZEB2O60315 1214 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 NEBLO76041 1014 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 KIF5AQ12840 1032 aa14.51□□□□□ -0.09
SYNCRIP-201ENST00000355238 NECAB1Q8N987 351 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms