RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 HMGB1P09429 215 aaKnown RBP9.16□□□□□ -0.94
SCN8A-201ENST00000354534 USP25Q9UHP3 1055 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.16□□□□□ -0.94
SCN8A-201ENST00000354534 ZBTB12Q9Y330 459 aaPredicted RBP9.16□□□□□ -0.94
SCN8A-201ENST00000354534 GCKP35557 465 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 TSNAXIP1Q2TAA8 658 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 HVCN1Q96D96 273 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 NEMFO60524 1076 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 ATP6V1E1P36543 226 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 CUL4BQ13620 913 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 ZBTB41Q5SVQ8 909 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 BICD1Q96G01 975 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 IGSF3O75054 1194 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
SCN8A-201ENST00000354534 CWC27Q6UX04 472 aaKnown RBP9.16□□□□□ -0.94
SCN8A-201ENST00000354534 GBP5Q96PP8 586 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC172P0C7W6 258 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 PHLDB2Q86SQ0 1253 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 USH1CQ9Y6N9 552 aa9.16□□□□□ -0.94
SCN8A-201ENST00000354534 ATP2A2P16615 1042 aaKnown RBP9.15□□□□□ -0.94
SCN8A-201ENST00000354534 SPAG5Q96R06 1193 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCN8A-201ENST00000354534 NCAPGQ9BPX3 1015 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 PPP6R1Q9UPN7 881 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 FCHSD2O94868 740 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 HNRNPMP52272 730 aaKnown RBP eCLIP9.15□□□□□ -0.94
SCN8A-201ENST00000354534 ANKRD24Q8TF21 1146 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 ZNF131P52739 623 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 CTAGE9A4FU28 777 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 GUCY1B3Q02153 619 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 UAP1Q16222 522 aaPredicted RBP9.15□□□□□ -0.94
SCN8A-201ENST00000354534 OPHN1O60890 802 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 AP1ARQ63HQ0 302 aa9.15□□□□□ -0.94
SCN8A-201ENST00000354534 CCDC7Q96M83 1385 aa9.15□□□□□ -0.95
SCN8A-201ENST00000354534 CETN3O15182 167 aa9.15□□□□□ -0.95
SCN8A-201ENST00000354534 FAM169AQ9Y6X4 670 aa9.15□□□□□ -0.95
SCN8A-201ENST00000354534 GNAI2P04899 355 aa9.15□□□□□ -0.95
SCN8A-201ENST00000354534 ZSCAN25Q6NSZ9 544 aa9.15□□□□□ -0.95
SCN8A-201ENST00000354534 RNF10Q8N5U6 811 aaKnown RBP9.15□□□□□ -0.95
SCN8A-201ENST00000354534 UBLCP1Q8WVY7 318 aaPredicted RBP9.15□□□□□ -0.95
SCN8A-201ENST00000354534 B4GALNT4Q76KP1 1039 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 CCDC50Q8IVM0 306 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
SCN8A-201ENST00000354534 GJC1P36383 396 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 IFT81Q8WYA0 676 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 GCC1Q96CN9 775 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 PDZRN3Q9UPQ7 1066 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 PHACTR2O75167 634 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 PRIMPOLQ96LW4 560 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 TLDC2A0PJX2 215 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 HGSO14964 777 aaPredicted RBP9.14□□□□□ -0.95
SCN8A-201ENST00000354534 RAPGEF4Q8WZA2 1011 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 GOLGA8AA7E2F4 631 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 PEX19P40855 299 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 IRX5P78411 483 aaPredicted RBP9.14□□□□□ -0.95
SCN8A-201ENST00000354534 HAUS7Q99871 368 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 ANLNQ9NQW6 1124 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 KIAA1524Q8TCG1 905 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 RAB34Q9BZG1 259 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 BIN1O00499 593 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 CCDC30Q5VVM6 783 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 RAPGEF2Q9Y4G8 1499 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 KANK4Q5T7N3 995 aaPredicted RBP9.14□□□□□ -0.95
SCN8A-201ENST00000354534 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
SCN8A-201ENST00000354534 RAP1GDS1P52306 607 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 TMEM266Q2M3C6 531 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CCDC38Q502W7 563 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 SMARCC2Q8TAQ2 1214 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 PLEKHH1Q9ULM0 1364 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 FAM76AQ8TAV0 307 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 PSPC1Q8WXF1 523 aaKnown RBP9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CTAGE15A4D2H0 777 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CTAGE8P0CG41 777 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CTAGE4Q8IX94 777 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CTAGE5O15320 804 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 MCUR1Q96AQ8 359 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 GAS8O95995 478 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 PTGS1P23219 599 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 CACYBPQ9HB71 228 aaKnown RBP9.13□□□□□ -0.95
SCN8A-201ENST00000354534 FAF1Q9UNN5 650 aaPredicted RBP9.13□□□□□ -0.95
SCN8A-201ENST00000354534 NLRP2Q9NX02 1062 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 PIP4K2BP78356 416 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 NUCKS1Q9H1E3 243 aaKnown RBP9.13□□□□□ -0.95
SCN8A-201ENST00000354534 HMGB1P1B2RPK0 211 aaPredicted RBP9.13□□□□□ -0.95
SCN8A-201ENST00000354534 RNF8O76064 485 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 RPAINQ86UA6 219 aa9.13□□□□□ -0.95
SCN8A-201ENST00000354534 ZSCAN31Q96LW9 406 aaPredicted RBP9.12□□□□□ -0.95
SCN8A-201ENST00000354534 WDR46O15213 610 aaKnown RBP9.12□□□□□ -0.95
SCN8A-201ENST00000354534 STX6O43752 255 aa9.12□□□□□ -0.95
SCN8A-201ENST00000354534 KIF20AO95235 890 aa9.12□□□□□ -0.95
SCN8A-201ENST00000354534 FYB2Q5VWT5 728 aa9.12□□□□□ -0.95
SCN8A-201ENST00000354534 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms