RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 JCADQ9P266 1359 aa11.5□□□□□ -0.57
RPE-201ENST00000354506 SASH1O94885 1247 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 MAP4K1Q92918 833 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 EVI5LQ96CN4 794 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 ALDH8A1Q9H2A2 487 aaPredicted RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 MTMR6Q9Y217 621 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 MAP3K2Q9Y2U5 619 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 A0A087WWV3 80 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 CKAP2LQ8IYA6 745 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 CLASRPQ8N2M8 674 aaKnown RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 KCNJ4P48050 445 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 KIAA2012Q0VF49 1180 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 PLEKHO1Q53GL0 409 aaPredicted RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 MPRIPQ6WCQ1 1025 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 ARHGEF25Q86VW2 580 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 LRRC59Q96AG4 307 aaKnown RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 TFIP11Q9UBB9 837 aaKnown RBP11.49□□□□□ -0.57
RPE-201ENST00000354506 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
RPE-201ENST00000354506 SETD1BQ9UPS6 1966 aaKnown RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 CEBPZQ03701 1054 aaKnown RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 ERC1Q8IUD2 1116 aa11.48□□□□□ -0.57
RPE-201ENST00000354506 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 SH2B1Q9NRF2 756 aaPredicted RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 TRPM3Q9HCF6 1732 aaPredicted RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 ME3Q16798 604 aa11.48□□□□□ -0.57
RPE-201ENST00000354506 SIL1Q9H173 461 aa11.48□□□□□ -0.57
RPE-201ENST00000354506 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
RPE-201ENST00000354506 NPHP4O75161 1426 aaPredicted RBP11.48□□□□□ -0.57
RPE-201ENST00000354506 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 AP5Z1O43299 807 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 MST1RQ04912 1400 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 GJB2P29033 226 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 TSGA10IPQ3SY00 556 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 ZNF530Q6P9A1 599 aaPredicted RBP11.47□□□□□ -0.57
RPE-201ENST00000354506 CCDC171Q6TFL3 1326 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 EAF2Q96CJ1 260 aaPredicted RBP11.47□□□□□ -0.57
RPE-201ENST00000354506 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 CHGBP05060 677 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 TEFQ10587 303 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
RPE-201ENST00000354506 LINS1Q8NG48 757 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 JAKMIP1Q96N16 626 aaKnown RBP11.47□□□□□ -0.57
RPE-201ENST00000354506 TPCN1Q9ULQ1 816 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 ATP6V1DQ9Y5K8 247 aa11.47□□□□□ -0.57
RPE-201ENST00000354506 C5P01031 1676 aa11.46□□□□□ -0.57
RPE-201ENST00000354506 AIMP1Q12904 312 aaKnown RBP11.46□□□□□ -0.57
RPE-201ENST00000354506 DIAPH3Q9NSV4 1193 aa11.46□□□□□ -0.57
RPE-201ENST00000354506 PYCARDQ9ULZ3 195 aa11.46□□□□□ -0.57
RPE-201ENST00000354506 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.58
RPE-201ENST00000354506 KLHDC4Q8TBB5 520 aa11.46□□□□□ -0.58
RPE-201ENST00000354506 HDAC5Q9UQL6 1122 aa11.46□□□□□ -0.58
RPE-201ENST00000354506 CYP46A1Q9Y6A2 500 aa11.46□□□□□ -0.58
RPE-201ENST00000354506 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
RPE-201ENST00000354506 MED23Q9ULK4 1368 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 GRM8O00222 908 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 KDM4AO75164 1064 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 GCP02774 474 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 PDIA4P13667 645 aaKnown RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 NAA30Q147X3 362 aaPredicted RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 NOLC1Q14978 699 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPE-201ENST00000354506 IGKV5-2P06315 115 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 PIP4K2AP48426 406 aaPredicted RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 LMOD2Q6P5Q4 547 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 DRC7Q8IY82 874 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 EDC3Q96F86 508 aaKnown RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 DDX11Q96FC9 970 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 FAM227BQ96M60 508 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
RPE-201ENST00000354506 C9orf78Q9NZ63 289 aaPredicted RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 RBM8AQ9Y5S9 174 aaKnown RBP11.45□□□□□ -0.58
RPE-201ENST00000354506 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 SCN11AQ9UI33 1791 aa11.45□□□□□ -0.58
RPE-201ENST00000354506 IFIT2P09913 472 aaKnown RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 LRP10Q7Z4F1 713 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 AXIN2Q9Y2T1 843 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 A0A0U1RQG5 324 aaPredicted RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 HIP1O00291 1037 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 SLC27A2O14975 620 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 PSME1Q06323 249 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 LRMPQ12912 555 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 USPL1Q5W0Q7 1092 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 AACSQ86V21 672 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 CCDC8Q9H0W5 538 aaPredicted RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 RGPD5Q99666 1765 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 ELP1O95163 1332 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 NMIQ13287 307 aaPredicted RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 ZNF592Q92610 1267 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 GPATCH3Q96I76 525 aa11.44□□□□□ -0.58
RPE-201ENST00000354506 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
RPE-201ENST00000354506 NPHP1O15259 732 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms